(8 nodes) Protein NPG1-like, and Hyccin network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0GDM5	Uncharacterized protein. (915 aa)
	A0A0E0GGJ0	Uncharacterized protein. (701 aa)
	A0A0E0GI39	TPR_REGION domain-containing protein. (707 aa)
	A0A0E0GLE4	Uncharacterized protein. (960 aa)
	A0A0E0GMM7	Uncharacterized protein. (726 aa)
	A0A0E0GT03	Uncharacterized protein. (337 aa)
	A0A0E0ITG1	TPR_REGION domain-containing protein. (727 aa)
	A0A0E0IYQ7	Uncharacterized protein. (428 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0GDM5	A0A0E0GGJ0	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A0E0GDM5	A0A0E0GI39	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.668
A0A0E0GDM5	A0A0E0GMM7	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A0E0GDM5	A0A0E0GT03	Uncharacterized protein.	Uncharacterized protein.	0.472
A0A0E0GDM5	A0A0E0ITG1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.638
A0A0E0GDM5	A0A0E0IYQ7	Uncharacterized protein.	Uncharacterized protein.	0.472
A0A0E0GGJ0	A0A0E0GDM5	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A0E0GGJ0	A0A0E0GLE4	Uncharacterized protein.	Uncharacterized protein.	0.602
A0A0E0GGJ0	A0A0E0GT03	Uncharacterized protein.	Uncharacterized protein.	0.721
A0A0E0GGJ0	A0A0E0IYQ7	Uncharacterized protein.	Uncharacterized protein.	0.721
A0A0E0GI39	A0A0E0GDM5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.668
A0A0E0GI39	A0A0E0GLE4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.638
A0A0E0GI39	A0A0E0GT03	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.754
A0A0E0GI39	A0A0E0IYQ7	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.754
A0A0E0GLE4	A0A0E0GGJ0	Uncharacterized protein.	Uncharacterized protein.	0.602
A0A0E0GLE4	A0A0E0GI39	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.638
A0A0E0GLE4	A0A0E0GMM7	Uncharacterized protein.	Uncharacterized protein.	0.550
A0A0E0GLE4	A0A0E0GT03	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0E0GLE4	A0A0E0ITG1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.673
A0A0E0GLE4	A0A0E0IYQ7	Uncharacterized protein.	Uncharacterized protein.	0.424