52 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FHA2	Uncharacterized protein. (179 aa)
	A0A0E0FIV7	Uncharacterized protein. (197 aa)
	A0A0E0FJ98	Uncharacterized protein. (99 aa)
	A0A0E0FNS7	Uncharacterized protein. (77 aa)
	A0A0E0FQG5	Uncharacterized protein. (69 aa)
	A0A0E0FQW0	GUB_WAK_bind domain-containing protein. (88 aa)
	A0A0E0FRH0	Exocyst subunit Exo70 family protein; Component of the exocyst complex. (148 aa)
	A0A0E0FS87	Uncharacterized protein. (205 aa)
	A0A0E0FUJ5	WAT1-related protein. (398 aa)
	A0A0E0FWP2	Uncharacterized protein. (265 aa)
	A0A0E0FWT4	Rhodanese domain-containing protein. (361 aa)
	A0A0E0G1M2	Uncharacterized protein. (78 aa)
	A0A0E0G2Q9	Knot1 domain-containing protein; Belongs to the DEFL family. (88 aa)
	A0A0E0G3Y5	Phytocyanin domain-containing protein. (216 aa)
	A0A0E0G896	Uncharacterized protein. (389 aa)
	A0A0E0G8B0	Uncharacterized protein. (67 aa)
	A0A0E0G8N5	Uncharacterized protein. (120 aa)
	A0A0E0GG98	Knot1 domain-containing protein; Belongs to the DEFL family. (81 aa)
	A0A0E0GGJ7	Uncharacterized protein. (108 aa)
	A0A0E0GKK1	Uncharacterized protein. (97 aa)
	A0A0E0GKK2	Uncharacterized protein. (81 aa)
	A0A0E0GKK4	Uncharacterized protein. (86 aa)
	A0A0E0GKK5	Uncharacterized protein. (86 aa)
	A0A0E0GKK6	Uncharacterized protein. (87 aa)
	A0A0E0GKK7	Uncharacterized protein. (221 aa)
	A0A0E0GN53	Abhydrolase_3 domain-containing protein. (86 aa)
	A0A0E0GXV9	Knot1 domain-containing protein; Belongs to the DEFL family. (72 aa)
	A0A0E0GXW4	Uncharacterized protein. (86 aa)
	A0A0E0GZN1	Uncharacterized protein. (142 aa)
	A0A0E0H3A2	Knot1 domain-containing protein; Belongs to the DEFL family. (81 aa)
	A0A0E0H752	VQ domain-containing protein. (145 aa)
	A0A0E0H765	CRIB domain-containing protein. (176 aa)
	A0A0E0HDH9	DYW_deaminase domain-containing protein. (193 aa)
	A0A0E0HED0	Uncharacterized protein. (419 aa)
	A0A0E0HGA3	WAT1-related protein. (407 aa)
	A0A0E0HLY1	Uncharacterized protein. (362 aa)
	A0A0E0HRG7	Uncharacterized protein. (77 aa)
	A0A0E0HRN2	Uncharacterized protein. (180 aa)
	A0A0E0HUZ1	Uncharacterized protein. (100 aa)
	A0A0E0HYL1	Uncharacterized protein. (156 aa)
	A0A0E0HZ83	F-box domain-containing protein. (276 aa)
	A0A0E0I017	Uncharacterized protein. (176 aa)
	A0A0E0I7T8	Uncharacterized protein. (90 aa)
	A0A0E0I7X8	Uncharacterized protein; Belongs to the histone H2A family. (169 aa)
	A0A0E0IJ82	Uncharacterized protein. (191 aa)
	A0A0E0IL16	NPH3 domain-containing protein; Belongs to the NPH3 family. (151 aa)
	A0A0E0ILG4	C2H2-type domain-containing protein. (131 aa)
	A0A0E0IMF0	Uncharacterized protein. (120 aa)
	A0A0E0IRY5	BURP domain-containing protein. (344 aa)
	A0A0E0IXQ7	VQ domain-containing protein. (161 aa)
	A0A0E0J1T1	Uncharacterized protein. (73 aa)
	A0A0E0J7U5	Uncharacterized protein. (166 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FHA2	A0A0E0FIV7	Uncharacterized protein.	Uncharacterized protein.	0.405
A0A0E0FHA2	A0A0E0FJ98	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A0E0FHA2	A0A0E0FQW0	Uncharacterized protein.	GUB_WAK_bind domain-containing protein.	0.507
A0A0E0FHA2	A0A0E0FRH0	Uncharacterized protein.	Exocyst subunit Exo70 family protein; Component of the exocyst complex.	0.486
A0A0E0FHA2	A0A0E0FUJ5	Uncharacterized protein.	WAT1-related protein.	0.411
A0A0E0FHA2	A0A0E0FWP2	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A0E0FHA2	A0A0E0G1M2	Uncharacterized protein.	Uncharacterized protein.	0.518
A0A0E0FHA2	A0A0E0G3Y5	Uncharacterized protein.	Phytocyanin domain-containing protein.	0.467
A0A0E0FHA2	A0A0E0G8N5	Uncharacterized protein.	Uncharacterized protein.	0.518
A0A0E0FHA2	A0A0E0GG98	Uncharacterized protein.	Knot1 domain-containing protein; Belongs to the DEFL family.	0.484
A0A0E0FHA2	A0A0E0GKK1	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A0E0FHA2	A0A0E0GKK2	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A0E0FHA2	A0A0E0GKK4	Uncharacterized protein.	Uncharacterized protein.	0.534
A0A0E0FHA2	A0A0E0GKK5	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A0E0FHA2	A0A0E0GKK6	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A0E0FHA2	A0A0E0GKK7	Uncharacterized protein.	Uncharacterized protein.	0.534
A0A0E0FHA2	A0A0E0GN53	Uncharacterized protein.	Abhydrolase_3 domain-containing protein.	0.518
A0A0E0FHA2	A0A0E0GXV9	Uncharacterized protein.	Knot1 domain-containing protein; Belongs to the DEFL family.	0.452
A0A0E0FHA2	A0A0E0GXW4	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A0E0FHA2	A0A0E0GZN1	Uncharacterized protein.	Uncharacterized protein.	0.533