13 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FLJ4	TPR_REGION domain-containing protein. (455 aa)
	A0A0E0FNT4	Uncharacterized protein. (187 aa)
	A0A0E0G0F4	Uncharacterized protein. (274 aa)
	A0A0E0G878	Uncharacterized protein. (241 aa)
	A0A0E0GGB5	VKc domain-containing protein. (372 aa)
	A0A0E0GIK5	Uncharacterized protein. (264 aa)
	A0A0E0GJM1	Uncharacterized protein. (157 aa)
	A0A0E0GTN1	Uncharacterized protein. (54 aa)
	A0A0E0HMG6	PPIase cyclophilin-type domain-containing protein. (430 aa)
	A0A0E0HX62	Uncharacterized protein. (334 aa)
	A0A0E0I0Z2	PPIase FKBP-type domain-containing protein. (243 aa)
	A0A0E0IUV7	Uncharacterized protein. (236 aa)
	A0A0E0JAA7	Uncharacterized protein. (113 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FLJ4	A0A0E0G0F4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.482
A0A0E0FLJ4	A0A0E0GIK5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.427
A0A0E0FLJ4	A0A0E0GJM1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.424
A0A0E0FLJ4	A0A0E0GTN1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.424
A0A0E0FNT4	A0A0E0G878	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A0E0FNT4	A0A0E0GJM1	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0E0FNT4	A0A0E0JAA7	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0E0G0F4	A0A0E0FLJ4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.482
A0A0E0G0F4	A0A0E0GJM1	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A0E0G0F4	A0A0E0GTN1	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A0E0G878	A0A0E0FNT4	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A0E0G878	A0A0E0GIK5	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0E0G878	A0A0E0GJM1	Uncharacterized protein.	Uncharacterized protein.	0.675
A0A0E0G878	A0A0E0HMG6	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.490
A0A0E0GGB5	A0A0E0GJM1	VKc domain-containing protein.	Uncharacterized protein.	0.471
A0A0E0GGB5	A0A0E0HMG6	VKc domain-containing protein.	PPIase cyclophilin-type domain-containing protein.	0.549
A0A0E0GGB5	A0A0E0I0Z2	VKc domain-containing protein.	PPIase FKBP-type domain-containing protein.	0.467
A0A0E0GGB5	A0A0E0IUV7	VKc domain-containing protein.	Uncharacterized protein.	0.503
A0A0E0GIK5	A0A0E0FLJ4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.427
A0A0E0GIK5	A0A0E0G878	Uncharacterized protein.	Uncharacterized protein.	0.528