STRINGSTRING
A0A0E0FHT0 A0A0E0FHT0 A0A0E0FI08 A0A0E0FI08 A0A0E0FI51 A0A0E0FI51 A0A0E0FL17 A0A0E0FL17 A0A0E0FL90 A0A0E0FL90 A0A0E0FM46 A0A0E0FM46 A0A0E0FMK5 A0A0E0FMK5 A0A0E0FML1 A0A0E0FML1 A0A0E0FN08 A0A0E0FN08 A0A0E0FN09 A0A0E0FN09 A0A0E0FNV4 A0A0E0FNV4 A0A0E0FR08 A0A0E0FR08 A0A0E0FR68 A0A0E0FR68 A0A0E0FR80 A0A0E0FR80 A0A0E0FTS0 A0A0E0FTS0 A0A0E0FU43 A0A0E0FU43 A0A0E0FVP7 A0A0E0FVP7 A0A0E0FWT1 A0A0E0FWT1 A0A0E0FXG5 A0A0E0FXG5 A0A0E0FZA5 A0A0E0FZA5 psbZ psbZ A0A0E0G052 A0A0E0G052 A0A0E0G0G3 A0A0E0G0G3 A0A0E0G1B8 A0A0E0G1B8 A0A0E0G9Y2 A0A0E0G9Y2 A0A0E0GAK2 A0A0E0GAK2 A0A0E0GB59 A0A0E0GB59 A0A0E0GBQ4 A0A0E0GBQ4 A0A0E0GCG6 A0A0E0GCG6 A0A0E0GCG8 A0A0E0GCG8 A0A0E0GHK4 A0A0E0GHK4 A0A0E0GHX9 A0A0E0GHX9 A0A0E0GI05 A0A0E0GI05 A0A0E0GI51 A0A0E0GI51 A0A0E0GJS7 A0A0E0GJS7 A0A0E0GL64 A0A0E0GL64 A0A0E0GNX8 A0A0E0GNX8 A0A0E0GP19 A0A0E0GP19 A0A0E0GPH7 A0A0E0GPH7 A0A0E0GQ58 A0A0E0GQ58 A0A0E0GQC3 A0A0E0GQC3 A0A0E0GQG6 A0A0E0GQG6 A0A0E0GR05 A0A0E0GR05 A0A0E0GR26 A0A0E0GR26 A0A0E0GR95 A0A0E0GR95 A0A0E0GSN9 A0A0E0GSN9 A0A0E0GVI9 A0A0E0GVI9 A0A0E0GVN7 A0A0E0GVN7 A0A0E0GW79 A0A0E0GW79 A0A0E0GWF4 A0A0E0GWF4 A0A0E0GZC7 A0A0E0GZC7 A0A0E0GZD0 A0A0E0GZD0 A0A0E0H151 A0A0E0H151 A0A0E0H2D4 A0A0E0H2D4 A0A0E0H2I4 A0A0E0H2I4 A0A0E0H303 A0A0E0H303 A0A0E0H4M5 A0A0E0H4M5 A0A0E0H670 A0A0E0H670 A0A0E0H6E1 A0A0E0H6E1 A0A0E0H6I8 A0A0E0H6I8 A0A0E0H7F9 A0A0E0H7F9 A0A0E0H7K0 A0A0E0H7K0 A0A0E0H7T8 A0A0E0H7T8 A0A0E0H859 A0A0E0H859 psaJ psaJ A0A0E0H8G2 A0A0E0H8G2 A0A0E0H919 A0A0E0H919 A0A0E0H9A4 A0A0E0H9A4 A0A0E0H9I3 A0A0E0H9I3 A0A0E0H9V8 A0A0E0H9V8 A0A0E0HAT3 A0A0E0HAT3 A0A0E0HB57 A0A0E0HB57 A0A0E0HC02 A0A0E0HC02 A0A0E0HCA2 A0A0E0HCA2 A0A0E0HD07 A0A0E0HD07 A0A0E0HDY2 A0A0E0HDY2 A0A0E0HE65 A0A0E0HE65 A0A0E0HFB6 A0A0E0HFB6 A0A0E0HGJ9 A0A0E0HGJ9 A0A0E0HGS3 A0A0E0HGS3 A0A0E0HHR2 A0A0E0HHR2 A0A0E0HI55 A0A0E0HI55 A0A0E0HKT4 A0A0E0HKT4 A0A0E0HP62 A0A0E0HP62 A0A0E0HPV9 A0A0E0HPV9 A0A0E0HPX3 A0A0E0HPX3 A0A0E0HTF3 A0A0E0HTF3 A0A0E0HU48 A0A0E0HU48 A0A0E0HUA0 A0A0E0HUA0 A0A0E0HUR7 A0A0E0HUR7 A0A0E0HX74 A0A0E0HX74 A0A0E0I085 A0A0E0I085 A0A0E0I088 A0A0E0I088 A0A0E0I0P7 A0A0E0I0P7 A0A0E0I195 A0A0E0I195 A0A0E0I1A0 A0A0E0I1A0 A0A0E0I3I8 A0A0E0I3I8 A0A0E0I3J0 A0A0E0I3J0 A0A0E0I3M7 A0A0E0I3M7 A0A0E0I3Y5 A0A0E0I3Y5 A0A0E0I474 A0A0E0I474 A0A0E0I535 A0A0E0I535 A0A0E0I7C8 A0A0E0I7C8 A0A0E0I7D0 A0A0E0I7D0 A0A0E0I7N8 A0A0E0I7N8 A0A0E0I9G7 A0A0E0I9G7 A0A0E0I9H1 A0A0E0I9H1 A0A0E0IAI0 A0A0E0IAI0 A0A0E0IC43 A0A0E0IC43 A0A0E0ICU6 A0A0E0ICU6 A0A0E0IDV6 A0A0E0IDV6 A0A0E0IEF6 A0A0E0IEF6 A0A0E0IET7 A0A0E0IET7 A0A0E0IF09 A0A0E0IF09 A0A0E0IG60 A0A0E0IG60 A0A0E0IJE5 A0A0E0IJE5 A0A0E0IJQ1 A0A0E0IJQ1 A0A0E0IJR6 A0A0E0IJR6 A0A0E0IJX4 A0A0E0IJX4 A0A0E0IMV6 A0A0E0IMV6 A0A0E0ING2 A0A0E0ING2 A0A0E0INM3 A0A0E0INM3 A0A0E0IQ68 A0A0E0IQ68 A0A0E0IQ94 A0A0E0IQ94 A0A0E0IRT8 A0A0E0IRT8 A0A0E0ITZ0 A0A0E0ITZ0 A0A0E0IUN2 A0A0E0IUN2 A0A0E0IVY5 A0A0E0IVY5 A0A0E0IY29 A0A0E0IY29 A0A0E0IYN4 A0A0E0IYN4 A0A0E0IZQ6 A0A0E0IZQ6 A0A0E0J492 A0A0E0J492 A0A0E0J5A6 A0A0E0J5A6 A0A0E0J5X8 A0A0E0J5X8 A0A0E0J763 A0A0E0J763 A0A0E0J7I4 A0A0E0J7I4 A0A0E0J7P9 A0A0E0J7P9 A0A0E0JB66 A0A0E0JB66 A0A0E0JBE2 A0A0E0JBE2 A0A0E0JBI3 A0A0E0JBI3 rpoC2 rpoC2 rpoC1 rpoC1 rpoB-2 rpoB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0E0FHT0CYCLIN domain-containing protein; Belongs to the cyclin family. (314 aa)
A0A0E0FI08Uncharacterized protein. (229 aa)
A0A0E0FI51Uncharacterized protein. (226 aa)
A0A0E0FL17Uncharacterized protein. (162 aa)
A0A0E0FL90Uncharacterized protein. (161 aa)
A0A0E0FM46TAF domain-containing protein. (622 aa)
A0A0E0FMK5RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1218 aa)
A0A0E0FML1SANTA domain-containing protein. (445 aa)
A0A0E0FN08HTH TFE/IIEalpha-type domain-containing protein. (291 aa)
A0A0E0FN09TFIIE domain-containing protein. (427 aa)
A0A0E0FNV4Uncharacterized protein. (187 aa)
A0A0E0FR08WD_REPEATS_REGION domain-containing protein. (633 aa)
A0A0E0FR68RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (478 aa)
A0A0E0FR80TAFII28 domain-containing protein. (501 aa)
A0A0E0FTS0TFIIF_beta domain-containing protein. (261 aa)
A0A0E0FU43RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1101 aa)
A0A0E0FVP7TFIID_20kDa domain-containing protein. (540 aa)
A0A0E0FWT1Uncharacterized protein. (229 aa)
A0A0E0FXG5Uncharacterized protein. (593 aa)
A0A0E0FZA5DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1549 aa)
psbZTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
A0A0E0G052RPOL4c domain-containing protein. (142 aa)
A0A0E0G0G3Uncharacterized protein. (263 aa)
A0A0E0G1B8DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2156 aa)
A0A0E0G9Y2Uncharacterized protein. (745 aa)
A0A0E0GAK2Uncharacterized protein. (728 aa)
A0A0E0GB59DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (106 aa)
A0A0E0GBQ4BTP domain-containing protein. (294 aa)
A0A0E0GCG6RPOL4c domain-containing protein. (251 aa)
A0A0E0GCG8RPOLD domain-containing protein. (359 aa)
A0A0E0GHK4TFIIE beta domain-containing protein. (272 aa)
A0A0E0GHX9TFIIB-type domain-containing protein. (308 aa)
A0A0E0GI05Uncharacterized protein. (529 aa)
A0A0E0GI51RPOL4c domain-containing protein. (230 aa)
A0A0E0GJS7Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (527 aa)
A0A0E0GL64RPOLD domain-containing protein. (377 aa)
A0A0E0GNX8DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
A0A0E0GP19Uncharacterized protein. (229 aa)
A0A0E0GPH7Uncharacterized protein. (809 aa)
A0A0E0GQ58Uncharacterized protein. (142 aa)
A0A0E0GQC3BTP domain-containing protein. (401 aa)
A0A0E0GQG6RNA_pol_Rbc25 domain-containing protein. (123 aa)
A0A0E0GR05DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1207 aa)
A0A0E0GR26C2 NT-type domain-containing protein. (784 aa)
A0A0E0GR95Uncharacterized protein. (213 aa)
A0A0E0GSN9DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
A0A0E0GVI9Uncharacterized protein. (652 aa)
A0A0E0GVN7Uncharacterized protein. (273 aa)
A0A0E0GW79SANT domain-containing protein. (996 aa)
A0A0E0GWF4Uncharacterized protein. (195 aa)
A0A0E0GZC7SANTA domain-containing protein. (609 aa)
A0A0E0GZD0Uncharacterized protein. (377 aa)
A0A0E0H151Uncharacterized protein. (279 aa)
A0A0E0H2D4Uncharacterized protein. (205 aa)
A0A0E0H2I4DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1332 aa)
A0A0E0H303General transcription factor IIH subunit. (470 aa)
A0A0E0H4M5RPOLA_N domain-containing protein. (1364 aa)
A0A0E0H670PPO1_KFDV domain-containing protein. (479 aa)
A0A0E0H6E1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1343 aa)
A0A0E0H6I8TFIID_20kDa domain-containing protein. (538 aa)
A0A0E0H7F9Uncharacterized protein. (1321 aa)
A0A0E0H7K0RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
A0A0E0H7T8HTH TFE/IIEalpha-type domain-containing protein. (462 aa)
A0A0E0H859Uncharacterized protein. (193 aa)
psaJTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (103 aa)
A0A0E0H8G2Uncharacterized protein. (112 aa)
A0A0E0H919RTR1-type domain-containing protein. (726 aa)
A0A0E0H9A4Helicase ATP-binding domain-containing protein. (758 aa)
A0A0E0H9I3DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1841 aa)
A0A0E0H9V8SHS2_Rpb7-N domain-containing protein. (175 aa)
A0A0E0HAT3Uncharacterized protein. (217 aa)
A0A0E0HB57Helicase ATP-binding domain-containing protein. (870 aa)
A0A0E0HC02Uncharacterized protein. (394 aa)
A0A0E0HCA2Uncharacterized protein. (545 aa)
A0A0E0HD07TAFII55_N domain-containing protein. (178 aa)
A0A0E0HDY2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (424 aa)
A0A0E0HE65Uncharacterized protein. (196 aa)
A0A0E0HFB6MAT1 domain-containing protein. (195 aa)
A0A0E0HGJ9Uncharacterized protein. (1569 aa)
A0A0E0HGS3TFIIF_beta domain-containing protein. (243 aa)
A0A0E0HHR2TFIIB-type domain-containing protein. (319 aa)
A0A0E0HI55Uncharacterized protein. (191 aa)
A0A0E0HKT4ULP_PROTEASE domain-containing protein. (1361 aa)
A0A0E0HP62Uncharacterized protein. (169 aa)
A0A0E0HPV9Uncharacterized protein. (227 aa)
A0A0E0HPX3MAT1 domain-containing protein. (195 aa)
A0A0E0HTF3DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1666 aa)
A0A0E0HU48Uncharacterized protein. (1798 aa)
A0A0E0HUA0WD_REPEATS_REGION domain-containing protein. (610 aa)
A0A0E0HUR7Uncharacterized protein. (543 aa)
A0A0E0HX74RNA_pol_L_2 domain-containing protein. (120 aa)
A0A0E0I085Uncharacterized protein. (140 aa)
A0A0E0I088Uncharacterized protein. (142 aa)
A0A0E0I0P7Uncharacterized protein. (202 aa)
A0A0E0I195TFIIB-type domain-containing protein. (354 aa)
A0A0E0I1A0Uncharacterized protein. (341 aa)
A0A0E0I3I8Phorbol-ester/DAG-type domain-containing protein. (190 aa)
A0A0E0I3J0Phorbol-ester/DAG-type domain-containing protein. (259 aa)
A0A0E0I3M7DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
A0A0E0I3Y5Uncharacterized protein. (822 aa)
A0A0E0I474Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (133 aa)
A0A0E0I535Uncharacterized protein. (245 aa)
A0A0E0I7C8DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1809 aa)
A0A0E0I7D0Uncharacterized protein. (144 aa)
A0A0E0I7N8DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1244 aa)
A0A0E0I9G7Uncharacterized protein. (270 aa)
A0A0E0I9H1Uncharacterized protein. (680 aa)
A0A0E0IAI0BSD domain-containing protein. (546 aa)
A0A0E0IC43Uncharacterized protein. (251 aa)
A0A0E0ICU6Uncharacterized protein. (164 aa)
A0A0E0IDV6Uncharacterized protein. (74 aa)
A0A0E0IEF6Uncharacterized protein. (245 aa)
A0A0E0IET7Uncharacterized protein. (564 aa)
A0A0E0IF09Uncharacterized protein. (573 aa)
A0A0E0IG60RPOLD domain-containing protein. (330 aa)
A0A0E0IJE5Uncharacterized protein. (1545 aa)
A0A0E0IJQ1Uncharacterized protein. (961 aa)
A0A0E0IJR6Uncharacterized protein. (302 aa)
A0A0E0IJX4Uncharacterized protein. (166 aa)
A0A0E0IMV6TFIIB-type domain-containing protein. (312 aa)
A0A0E0ING2DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1400 aa)
A0A0E0INM3X8 domain-containing protein. (524 aa)
A0A0E0IQ68TFIIS N-terminal domain-containing protein. (261 aa)
A0A0E0IQ94Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
A0A0E0IRT8Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (282 aa)
A0A0E0ITZ0Uncharacterized protein. (424 aa)
A0A0E0IUN2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1125 aa)
A0A0E0IVY5Uncharacterized protein. (255 aa)
A0A0E0IY29HTH TFE/IIEalpha-type domain-containing protein. (427 aa)
A0A0E0IYN4TFIIS N-terminal domain-containing protein. (338 aa)
A0A0E0IZQ6RNA_pol_L_2 domain-containing protein. (138 aa)
A0A0E0J492Uncharacterized protein. (495 aa)
A0A0E0J5A6Uncharacterized protein. (187 aa)
A0A0E0J5X8RPOLA_N domain-containing protein. (135 aa)
A0A0E0J763TFIIS N-terminal domain-containing protein. (340 aa)
A0A0E0J7I4Uncharacterized protein. (165 aa)
A0A0E0J7P9RNA_pol_L_2 domain-containing protein. (157 aa)
A0A0E0JB66DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
A0A0E0JBE2BTP domain-containing protein. (366 aa)
A0A0E0JBI3Uncharacterized protein. (259 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1513 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (682 aa)
rpoB-2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1075 aa)
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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