STRINGSTRING
A0A0E0FHT0 A0A0E0FHT0 A0A0E0FL17 A0A0E0FL17 A0A0E0FN08 A0A0E0FN08 A0A0E0FN09 A0A0E0FN09 A0A0E0FTS0 A0A0E0FTS0 A0A0E0FZA5 A0A0E0FZA5 psbZ psbZ A0A0E0G052 A0A0E0G052 A0A0E0G0G3 A0A0E0G0G3 A0A0E0G1B8 A0A0E0G1B8 A0A0E0GCG6 A0A0E0GCG6 A0A0E0GHK4 A0A0E0GHK4 A0A0E0GI05 A0A0E0GI05 A0A0E0GJS7 A0A0E0GJS7 A0A0E0GQ58 A0A0E0GQ58 A0A0E0GR05 A0A0E0GR05 A0A0E0GVI9 A0A0E0GVI9 A0A0E0GZD0 A0A0E0GZD0 A0A0E0H303 A0A0E0H303 A0A0E0H7F9 A0A0E0H7F9 A0A0E0H7K0 A0A0E0H7K0 A0A0E0H7T8 A0A0E0H7T8 psaJ psaJ A0A0E0H8G2 A0A0E0H8G2 A0A0E0H919 A0A0E0H919 A0A0E0H9A4 A0A0E0H9A4 A0A0E0H9V8 A0A0E0H9V8 A0A0E0HAT3 A0A0E0HAT3 A0A0E0HB57 A0A0E0HB57 A0A0E0HC02 A0A0E0HC02 A0A0E0HDY2 A0A0E0HDY2 A0A0E0HE65 A0A0E0HE65 A0A0E0HFB6 A0A0E0HFB6 A0A0E0HGJ9 A0A0E0HGJ9 A0A0E0HGS3 A0A0E0HGS3 A0A0E0HP62 A0A0E0HP62 A0A0E0HPV9 A0A0E0HPV9 A0A0E0HPX3 A0A0E0HPX3 A0A0E0HX74 A0A0E0HX74 A0A0E0I195 A0A0E0I195 A0A0E0I1A0 A0A0E0I1A0 A0A0E0I3I8 A0A0E0I3I8 A0A0E0I474 A0A0E0I474 A0A0E0IAI0 A0A0E0IAI0 A0A0E0IET7 A0A0E0IET7 A0A0E0IG60 A0A0E0IG60 A0A0E0IJQ1 A0A0E0IJQ1 A0A0E0IMV6 A0A0E0IMV6 A0A0E0IQ68 A0A0E0IQ68 A0A0E0IQ94 A0A0E0IQ94 A0A0E0IRT8 A0A0E0IRT8 A0A0E0IY29 A0A0E0IY29 A0A0E0IYN4 A0A0E0IYN4 A0A0E0J5A6 A0A0E0J5A6 A0A0E0J7I4 A0A0E0J7I4 A0A0E0JB66 A0A0E0JB66 A0A0E0JBI3 A0A0E0JBI3 rpoC2 rpoC2 rpoC1 rpoC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0E0FHT0CYCLIN domain-containing protein; Belongs to the cyclin family. (314 aa)
A0A0E0FL17Uncharacterized protein. (162 aa)
A0A0E0FN08HTH TFE/IIEalpha-type domain-containing protein. (291 aa)
A0A0E0FN09TFIIE domain-containing protein. (427 aa)
A0A0E0FTS0TFIIF_beta domain-containing protein. (261 aa)
A0A0E0FZA5DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1549 aa)
psbZTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
A0A0E0G052RPOL4c domain-containing protein. (142 aa)
A0A0E0G0G3Uncharacterized protein. (263 aa)
A0A0E0G1B8DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2156 aa)
A0A0E0GCG6RPOL4c domain-containing protein. (251 aa)
A0A0E0GHK4TFIIE beta domain-containing protein. (272 aa)
A0A0E0GI05Uncharacterized protein. (529 aa)
A0A0E0GJS7Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (527 aa)
A0A0E0GQ58Uncharacterized protein. (142 aa)
A0A0E0GR05DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1207 aa)
A0A0E0GVI9Uncharacterized protein. (652 aa)
A0A0E0GZD0Uncharacterized protein. (377 aa)
A0A0E0H303General transcription factor IIH subunit. (470 aa)
A0A0E0H7F9Uncharacterized protein. (1321 aa)
A0A0E0H7K0RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
A0A0E0H7T8HTH TFE/IIEalpha-type domain-containing protein. (462 aa)
psaJTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (103 aa)
A0A0E0H8G2Uncharacterized protein. (112 aa)
A0A0E0H919RTR1-type domain-containing protein. (726 aa)
A0A0E0H9A4Helicase ATP-binding domain-containing protein. (758 aa)
A0A0E0H9V8SHS2_Rpb7-N domain-containing protein. (175 aa)
A0A0E0HAT3Uncharacterized protein. (217 aa)
A0A0E0HB57Helicase ATP-binding domain-containing protein. (870 aa)
A0A0E0HC02Uncharacterized protein. (394 aa)
A0A0E0HDY2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (424 aa)
A0A0E0HE65Uncharacterized protein. (196 aa)
A0A0E0HFB6MAT1 domain-containing protein. (195 aa)
A0A0E0HGJ9Uncharacterized protein. (1569 aa)
A0A0E0HGS3TFIIF_beta domain-containing protein. (243 aa)
A0A0E0HP62Uncharacterized protein. (169 aa)
A0A0E0HPV9Uncharacterized protein. (227 aa)
A0A0E0HPX3MAT1 domain-containing protein. (195 aa)
A0A0E0HX74RNA_pol_L_2 domain-containing protein. (120 aa)
A0A0E0I195TFIIB-type domain-containing protein. (354 aa)
A0A0E0I1A0Uncharacterized protein. (341 aa)
A0A0E0I3I8Phorbol-ester/DAG-type domain-containing protein. (190 aa)
A0A0E0I474Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (133 aa)
A0A0E0IAI0BSD domain-containing protein. (546 aa)
A0A0E0IET7Uncharacterized protein. (564 aa)
A0A0E0IG60RPOLD domain-containing protein. (330 aa)
A0A0E0IJQ1Uncharacterized protein. (961 aa)
A0A0E0IMV6TFIIB-type domain-containing protein. (312 aa)
A0A0E0IQ68TFIIS N-terminal domain-containing protein. (261 aa)
A0A0E0IQ94Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
A0A0E0IRT8Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (282 aa)
A0A0E0IY29HTH TFE/IIEalpha-type domain-containing protein. (427 aa)
A0A0E0IYN4TFIIS N-terminal domain-containing protein. (338 aa)
A0A0E0J5A6Uncharacterized protein. (187 aa)
A0A0E0J7I4Uncharacterized protein. (165 aa)
A0A0E0JB66DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
A0A0E0JBI3Uncharacterized protein. (259 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1513 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (682 aa)
Your Current Organism:
Oryza sativa f. spontanea
NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.
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