(5 nodes) CDK-activating kinase assembly factor MAT1, and ATP-dependent helicase Rad3/Chl1-like network (Oryza sativa f. spontanea)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FN09	TFIIE domain-containing protein. (427 aa)
	A0A0E0H8G2	Uncharacterized protein. (112 aa)
	A0A0E0HB57	Helicase ATP-binding domain-containing protein. (870 aa)
	A0A0E0HFB6	MAT1 domain-containing protein. (195 aa)
	A0A0E0HPX3	MAT1 domain-containing protein. (195 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FN09	A0A0E0H8G2	TFIIE domain-containing protein.	Uncharacterized protein.	0.910
A0A0E0FN09	A0A0E0HB57	TFIIE domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.910
A0A0E0FN09	A0A0E0HFB6	TFIIE domain-containing protein.	MAT1 domain-containing protein.	0.917
A0A0E0FN09	A0A0E0HPX3	TFIIE domain-containing protein.	MAT1 domain-containing protein.	0.917
A0A0E0H8G2	A0A0E0FN09	Uncharacterized protein.	TFIIE domain-containing protein.	0.910
A0A0E0H8G2	A0A0E0HB57	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.852
A0A0E0H8G2	A0A0E0HFB6	Uncharacterized protein.	MAT1 domain-containing protein.	0.940
A0A0E0H8G2	A0A0E0HPX3	Uncharacterized protein.	MAT1 domain-containing protein.	0.940
A0A0E0HB57	A0A0E0FN09	Helicase ATP-binding domain-containing protein.	TFIIE domain-containing protein.	0.910
A0A0E0HB57	A0A0E0H8G2	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.852
A0A0E0HB57	A0A0E0HFB6	Helicase ATP-binding domain-containing protein.	MAT1 domain-containing protein.	0.924
A0A0E0HB57	A0A0E0HPX3	Helicase ATP-binding domain-containing protein.	MAT1 domain-containing protein.	0.924
A0A0E0HFB6	A0A0E0FN09	MAT1 domain-containing protein.	TFIIE domain-containing protein.	0.917
A0A0E0HFB6	A0A0E0H8G2	MAT1 domain-containing protein.	Uncharacterized protein.	0.940
A0A0E0HFB6	A0A0E0HB57	MAT1 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.924
A0A0E0HFB6	A0A0E0HPX3	MAT1 domain-containing protein.	MAT1 domain-containing protein.	0.953
A0A0E0HPX3	A0A0E0FN09	MAT1 domain-containing protein.	TFIIE domain-containing protein.	0.917
A0A0E0HPX3	A0A0E0H8G2	MAT1 domain-containing protein.	Uncharacterized protein.	0.940
A0A0E0HPX3	A0A0E0HB57	MAT1 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.924
A0A0E0HPX3	A0A0E0HFB6	MAT1 domain-containing protein.	MAT1 domain-containing protein.	0.953