31 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FGV2	Usp domain-containing protein. (438 aa)
	A0A0E0FHH0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (292 aa)
	A0A0E0FL29	Protein translocase subunit SecA; Belongs to the SecA family. (1084 aa)
	A0A0E0FU72	Usp domain-containing protein. (272 aa)
	A0A0E0FYQ5	WD_REPEATS_REGION domain-containing protein. (431 aa)
	A0A0E0G0M3	Uncharacterized protein. (3039 aa)
	A0A0E0G1L4	Uncharacterized protein. (1377 aa)
	A0A0E0GBY3	Usp domain-containing protein. (177 aa)
	A0A0E0GLB1	Usp domain-containing protein. (192 aa)
	A0A0E0GU74	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (246 aa)
	A0A0E0H440	Tr-type G domain-containing protein. (680 aa)
	A0A0E0H6Z2	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (365 aa)
	A0A0E0H7F4	RING-type domain-containing protein. (4737 aa)
	A0A0E0H7I1	Uncharacterized protein. (736 aa)
	A0A0E0H970	RING-type domain-containing protein. (868 aa)
	A0A0E0H9V9	Usp domain-containing protein. (170 aa)
	A0A0E0HA56	Usp domain-containing protein. (221 aa)
	A0A0E0HD90	Uncharacterized protein. (141 aa)
	A0A0E0HLF0	Uncharacterized protein. (403 aa)
	A0A0E0HVZ3	Uncharacterized protein. (1736 aa)
	A0A0E0I255	Usp domain-containing protein. (268 aa)
	A0A0E0I9K7	Uncharacterized protein. (427 aa)
	A0A0E0IDV9	SECA_MOTOR_DEAD domain-containing protein. (1014 aa)
	A0A0E0IIK1	RING-type domain-containing protein. (657 aa)
	A0A0E0IT02	Uncharacterized protein. (475 aa)
	A0A0E0IW20	Uncharacterized protein. (1638 aa)
	A0A0E0IWF3	Uncharacterized protein. (2036 aa)
	A0A0E0IXR4	Uncharacterized protein. (368 aa)
	A0A0E0IXR5	Uncharacterized protein. (1176 aa)
	A0A0E0J565	WD_REPEATS_REGION domain-containing protein. (323 aa)
	A0A0E0J675	Alpha-L-AF_C domain-containing protein. (209 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FGV2	A0A0E0FL29	Usp domain-containing protein.	Protein translocase subunit SecA; Belongs to the SecA family.	0.555
A0A0E0FGV2	A0A0E0G0M3	Usp domain-containing protein.	Uncharacterized protein.	0.555
A0A0E0FGV2	A0A0E0G1L4	Usp domain-containing protein.	Uncharacterized protein.	0.759
A0A0E0FGV2	A0A0E0H440	Usp domain-containing protein.	Tr-type G domain-containing protein.	0.630
A0A0E0FGV2	A0A0E0H7F4	Usp domain-containing protein.	RING-type domain-containing protein.	0.489
A0A0E0FGV2	A0A0E0H7I1	Usp domain-containing protein.	Uncharacterized protein.	0.630
A0A0E0FGV2	A0A0E0H970	Usp domain-containing protein.	RING-type domain-containing protein.	0.489
A0A0E0FGV2	A0A0E0IDV9	Usp domain-containing protein.	SECA_MOTOR_DEAD domain-containing protein.	0.555
A0A0E0FGV2	A0A0E0IIK1	Usp domain-containing protein.	RING-type domain-containing protein.	0.489
A0A0E0FGV2	A0A0E0IT02	Usp domain-containing protein.	Uncharacterized protein.	0.555
A0A0E0FGV2	A0A0E0IW20	Usp domain-containing protein.	Uncharacterized protein.	0.835
A0A0E0FGV2	A0A0E0IWF3	Usp domain-containing protein.	Uncharacterized protein.	0.555
A0A0E0FGV2	A0A0E0IXR4	Usp domain-containing protein.	Uncharacterized protein.	0.419
A0A0E0FGV2	A0A0E0IXR5	Usp domain-containing protein.	Uncharacterized protein.	0.419
A0A0E0FGV2	A0A0E0J675	Usp domain-containing protein.	Alpha-L-AF_C domain-containing protein.	0.419
A0A0E0FHH0	A0A0E0FL29	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein translocase subunit SecA; Belongs to the SecA family.	0.749
A0A0E0FHH0	A0A0E0G0M3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.749
A0A0E0FHH0	A0A0E0H7F4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.957
A0A0E0FHH0	A0A0E0H970	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.957
A0A0E0FHH0	A0A0E0HVZ3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.760