7 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0G1L4	Uncharacterized protein. (1377 aa)
	A0A0E0H440	Tr-type G domain-containing protein. (680 aa)
	A0A0E0H6Z2	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (365 aa)
	A0A0E0H7I1	Uncharacterized protein. (736 aa)
	A0A0E0HLF0	Uncharacterized protein. (403 aa)
	A0A0E0IW20	Uncharacterized protein. (1638 aa)
	A0A0E0J565	WD_REPEATS_REGION domain-containing protein. (323 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0G1L4	A0A0E0H440	Uncharacterized protein.	Tr-type G domain-containing protein.	0.833
A0A0E0G1L4	A0A0E0H6Z2	Uncharacterized protein.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.596
A0A0E0G1L4	A0A0E0H7I1	Uncharacterized protein.	Uncharacterized protein.	0.833
A0A0E0G1L4	A0A0E0HLF0	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A0E0G1L4	A0A0E0IW20	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A0E0G1L4	A0A0E0J565	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.853
A0A0E0H440	A0A0E0G1L4	Tr-type G domain-containing protein.	Uncharacterized protein.	0.833
A0A0E0H440	A0A0E0H6Z2	Tr-type G domain-containing protein.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.933
A0A0E0H440	A0A0E0H7I1	Tr-type G domain-containing protein.	Uncharacterized protein.	0.928
A0A0E0H440	A0A0E0HLF0	Tr-type G domain-containing protein.	Uncharacterized protein.	0.630
A0A0E0H440	A0A0E0IW20	Tr-type G domain-containing protein.	Uncharacterized protein.	0.852
A0A0E0H440	A0A0E0J565	Tr-type G domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.630
A0A0E0H6Z2	A0A0E0G1L4	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Uncharacterized protein.	0.596
A0A0E0H6Z2	A0A0E0H440	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Tr-type G domain-containing protein.	0.933
A0A0E0H6Z2	A0A0E0H7I1	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Uncharacterized protein.	0.933
A0A0E0H6Z2	A0A0E0IW20	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Uncharacterized protein.	0.518
A0A0E0H7I1	A0A0E0G1L4	Uncharacterized protein.	Uncharacterized protein.	0.833
A0A0E0H7I1	A0A0E0H440	Uncharacterized protein.	Tr-type G domain-containing protein.	0.928
A0A0E0H7I1	A0A0E0H6Z2	Uncharacterized protein.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.933
A0A0E0H7I1	A0A0E0HLF0	Uncharacterized protein.	Uncharacterized protein.	0.630