8 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0IV43	HHH_2 domain-containing protein. (339 aa)
	A0A0E0FRJ6	Uncharacterized protein. (747 aa)
	A0A0E0G5E2	WD_REPEATS_REGION domain-containing protein. (489 aa)
	A0A0E0GFG8	ERCC4 domain-containing protein. (995 aa)
	A0A0E0H6H9	Uncharacterized protein. (458 aa)
	A0A0E0GWH0	Uncharacterized protein. (726 aa)
	A0A0E0IC31	Uncharacterized protein. (891 aa)
	A0A0E0IET7	Uncharacterized protein. (564 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FRJ6	A0A0E0G5E2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.731
A0A0E0FRJ6	A0A0E0GFG8	Uncharacterized protein.	ERCC4 domain-containing protein.	0.862
A0A0E0FRJ6	A0A0E0H6H9	Uncharacterized protein.	Uncharacterized protein.	0.731
A0A0E0FRJ6	A0A0E0IC31	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A0E0FRJ6	A0A0E0IV43	Uncharacterized protein.	HHH_2 domain-containing protein.	0.798
A0A0E0G5E2	A0A0E0FRJ6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.731
A0A0E0G5E2	A0A0E0GWH0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.731
A0A0E0G5E2	A0A0E0IC31	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.463
A0A0E0G5E2	A0A0E0IET7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.731
A0A0E0GFG8	A0A0E0FRJ6	ERCC4 domain-containing protein.	Uncharacterized protein.	0.862
A0A0E0GFG8	A0A0E0GWH0	ERCC4 domain-containing protein.	Uncharacterized protein.	0.862
A0A0E0GFG8	A0A0E0IC31	ERCC4 domain-containing protein.	Uncharacterized protein.	0.577
A0A0E0GFG8	A0A0E0IET7	ERCC4 domain-containing protein.	Uncharacterized protein.	0.862
A0A0E0GFG8	A0A0E0IV43	ERCC4 domain-containing protein.	HHH_2 domain-containing protein.	0.999
A0A0E0GWH0	A0A0E0G5E2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.731
A0A0E0GWH0	A0A0E0GFG8	Uncharacterized protein.	ERCC4 domain-containing protein.	0.862
A0A0E0GWH0	A0A0E0H6H9	Uncharacterized protein.	Uncharacterized protein.	0.731
A0A0E0GWH0	A0A0E0IC31	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A0E0GWH0	A0A0E0IV43	Uncharacterized protein.	HHH_2 domain-containing protein.	0.798
A0A0E0H6H9	A0A0E0FRJ6	Uncharacterized protein.	Uncharacterized protein.	0.731