18 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0JBI1	Uncharacterized protein. (664 aa)
	A0A0E0FG56	TFIIS N-terminal domain-containing protein. (535 aa)
	A0A0E0FNX5	Plus3 domain-containing protein. (681 aa)
	A0A0E0FXS7	Uncharacterized protein. (667 aa)
	A0A0E0FY71	CID domain-containing protein. (469 aa)
	A0A0E0G0R4	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (105 aa)
	A0A0E0G539	Uncharacterized protein. (722 aa)
	A0A0E0GFR6	Uncharacterized protein. (1052 aa)
	A0A0E0GKM2	CID domain-containing protein. (515 aa)
	A0A0E0GRF2	Uncharacterized protein. (358 aa)
	A0A0E0GTZ7	Uncharacterized protein. (606 aa)
	A0A0E0GV93	CID domain-containing protein. (698 aa)
	A0A0E0I0I6	Uncharacterized protein. (1024 aa)
	A0A0E0I474	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (133 aa)
	A0A0E0I4H6	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (89 aa)
	A0A0E0I7E1	Uncharacterized protein. (786 aa)
	A0A0E0I7Y7	CID domain-containing protein. (1014 aa)
	A0A0E0IXP9	CID domain-containing protein. (389 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FG56	A0A0E0FNX5	TFIIS N-terminal domain-containing protein.	Plus3 domain-containing protein.	0.945
A0A0E0FG56	A0A0E0FXS7	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.906
A0A0E0FG56	A0A0E0G0R4	TFIIS N-terminal domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.909
A0A0E0FG56	A0A0E0GFR6	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.428
A0A0E0FG56	A0A0E0GRF2	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.901
A0A0E0FG56	A0A0E0GTZ7	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.906
A0A0E0FG56	A0A0E0I0I6	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.960
A0A0E0FG56	A0A0E0I474	TFIIS N-terminal domain-containing protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.956
A0A0E0FG56	A0A0E0I4H6	TFIIS N-terminal domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.909
A0A0E0FG56	A0A0E0I7E1	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.857
A0A0E0FG56	A0A0E0I7Y7	TFIIS N-terminal domain-containing protein.	CID domain-containing protein.	0.428
A0A0E0FG56	A0A0E0JBI1	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.906
A0A0E0FNX5	A0A0E0FG56	Plus3 domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.945
A0A0E0FNX5	A0A0E0FXS7	Plus3 domain-containing protein.	Uncharacterized protein.	0.982
A0A0E0FNX5	A0A0E0G0R4	Plus3 domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.777
A0A0E0FNX5	A0A0E0GRF2	Plus3 domain-containing protein.	Uncharacterized protein.	0.991
A0A0E0FNX5	A0A0E0GTZ7	Plus3 domain-containing protein.	Uncharacterized protein.	0.982
A0A0E0FNX5	A0A0E0I0I6	Plus3 domain-containing protein.	Uncharacterized protein.	0.987
A0A0E0FNX5	A0A0E0I474	Plus3 domain-containing protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.946
A0A0E0FNX5	A0A0E0I4H6	Plus3 domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.777