39 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0J9W5	Uncharacterized protein. (131 aa)
	A0A0E0J8T0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (414 aa)
	A0A0E0J3A5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (376 aa)
	A0A0E0ING5	Uncharacterized protein. (522 aa)
	A0A0E0IIW9	4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. (418 aa)
	A0A0E0IED3	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (319 aa)
	A0A0E0IBE7	Uncharacterized protein. (154 aa)
	A0A0E0IBE5	4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. (400 aa)
	A0A0E0FG94	Uncharacterized protein. (350 aa)
	A0A0E0I836	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (393 aa)
	A0A0E0I3I7	Alkyl transferase; Belongs to the UPP synthase family. (335 aa)
	A0A0E0I2U5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (371 aa)
	A0A0E0I2Q3	Uncharacterized protein. (379 aa)
	A0A0E0FI15	Alkyl transferase; Belongs to the UPP synthase family. (299 aa)
	A0A0E0FJW9	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. (555 aa)
	A0A0E0HVU7	Uncharacterized protein. (421 aa)
	A0A0E0HU58	Uncharacterized protein. (358 aa)
	A0A0E0HHL8	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (355 aa)
	A0A0E0HD35	Uncharacterized protein. (360 aa)
	A0A0E0HBC3	Uncharacterized protein. (93 aa)
	A0A0E0GV69	Uncharacterized protein. (405 aa)
	A0A0E0GQS6	Uncharacterized protein. (168 aa)
	A0A0E0GHY0	Uncharacterized protein. (226 aa)
	A0A0E0GD44	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (430 aa)
	A0A0E0GD39	Uncharacterized protein. (691 aa)
	A0A0E0G8B6	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (407 aa)
	A0A0E0G284	Uncharacterized protein. (369 aa)
	A0A0E0FWJ3	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (228 aa)
	A0A0E0FWJ2	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (195 aa)
	A0A0E0FVY3	Alkyl transferase; Belongs to the UPP synthase family. (295 aa)
	A0A0E0FSU4	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (511 aa)
	A0A0E0FRU0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (353 aa)
	A0A0E0FRC2	Uncharacterized protein. (466 aa)
	A0A0E0FR51	Uncharacterized protein. (608 aa)
	A0A0E0FP24	Uncharacterized protein. (188 aa)
	A0A0E0FP22	Uncharacterized protein. (331 aa)
	A0A0E0FMJ6	Uncharacterized protein. (437 aa)
	A0A0E0JCR1	Uncharacterized protein. (398 aa)
	A0A0E0JB21	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (403 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FG94	A0A0E0FSU4	Uncharacterized protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.494
A0A0E0FI15	A0A0E0FMJ6	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.545
A0A0E0FI15	A0A0E0FP22	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.718
A0A0E0FI15	A0A0E0FP24	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.718
A0A0E0FI15	A0A0E0FR51	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.883
A0A0E0FI15	A0A0E0FRU0	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.885
A0A0E0FI15	A0A0E0FSU4	Alkyl transferase; Belongs to the UPP synthase family.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.951
A0A0E0FI15	A0A0E0FVY3	Alkyl transferase; Belongs to the UPP synthase family.	Alkyl transferase; Belongs to the UPP synthase family.	0.874
A0A0E0FI15	A0A0E0G284	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.798
A0A0E0FI15	A0A0E0G8B6	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.888
A0A0E0FI15	A0A0E0GD44	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.695
A0A0E0FI15	A0A0E0GQS6	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.718
A0A0E0FI15	A0A0E0GV69	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.883
A0A0E0FI15	A0A0E0HBC3	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.849
A0A0E0FI15	A0A0E0HHL8	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.884
A0A0E0FI15	A0A0E0HU58	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.718
A0A0E0FI15	A0A0E0HVU7	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.883
A0A0E0FI15	A0A0E0I2U5	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.940
A0A0E0FI15	A0A0E0I836	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.695
A0A0E0FI15	A0A0E0IBE5	Alkyl transferase; Belongs to the UPP synthase family.	4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.	0.718