23 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0GTN1	Uncharacterized protein. (54 aa)
	A0A0E0J058	Rieske domain-containing protein. (277 aa)
	A0A0E0IFL1	NmrA domain-containing protein. (386 aa)
	A0A0E0IA72	Rubredoxin-like domain-containing protein. (217 aa)
	A0A0E0I886	Uncharacterized protein. (130 aa)
	A0A0E0I0Z2	PPIase FKBP-type domain-containing protein. (243 aa)
	A0A0E0HX62	Uncharacterized protein. (334 aa)
	A0A0E0HV26	Uncharacterized protein. (648 aa)
	A0A0E0HRV6	Uncharacterized protein. (287 aa)
	A0A0E0HQR2	Uncharacterized protein. (845 aa)
	A0A0E0HMG6	PPIase cyclophilin-type domain-containing protein. (430 aa)
	A0A0E0HJ42	Uncharacterized protein. (500 aa)
	A0A0E0HC03	Uncharacterized protein. (112 aa)
	A0A0E0GVR7	Uncharacterized protein. (261 aa)
	A0A0E0J063	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (283 aa)
	A0A0E0GGB5	VKc domain-containing protein. (372 aa)
	A0A0E0G0V4	Uncharacterized protein. (598 aa)
	A0A0E0FY36	Uncharacterized protein. (92 aa)
	A0A0E0JAA7	Uncharacterized protein. (113 aa)
	A0A0E0FLJ4	TPR_REGION domain-containing protein. (455 aa)
	A0A0E0FLT8	Uncharacterized protein. (333 aa)
	A0A0E0FNT4	Uncharacterized protein. (187 aa)
	A0A0E0J926	PPR_long domain-containing protein. (673 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FLJ4	A0A0E0GTN1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.424
A0A0E0FLJ4	A0A0E0HQR2	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.471
A0A0E0FLJ4	A0A0E0J058	TPR_REGION domain-containing protein.	Rieske domain-containing protein.	0.429
A0A0E0FLT8	A0A0E0GGB5	Uncharacterized protein.	VKc domain-containing protein.	0.669
A0A0E0FLT8	A0A0E0GVR7	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A0E0FLT8	A0A0E0HMG6	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.661
A0A0E0FLT8	A0A0E0HRV6	Uncharacterized protein.	Uncharacterized protein.	0.731
A0A0E0FLT8	A0A0E0I886	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A0E0FLT8	A0A0E0J063	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.974
A0A0E0FNT4	A0A0E0G0V4	Uncharacterized protein.	Uncharacterized protein.	0.451
A0A0E0FNT4	A0A0E0HC03	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0E0FNT4	A0A0E0HV26	Uncharacterized protein.	Uncharacterized protein.	0.451
A0A0E0FNT4	A0A0E0IFL1	Uncharacterized protein.	NmrA domain-containing protein.	0.535
A0A0E0FNT4	A0A0E0J063	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.529
A0A0E0FNT4	A0A0E0JAA7	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A0E0G0V4	A0A0E0FNT4	Uncharacterized protein.	Uncharacterized protein.	0.451
A0A0E0G0V4	A0A0E0GGB5	Uncharacterized protein.	VKc domain-containing protein.	0.610
A0A0E0G0V4	A0A0E0IFL1	Uncharacterized protein.	NmrA domain-containing protein.	0.531
A0A0E0GGB5	A0A0E0FLT8	VKc domain-containing protein.	Uncharacterized protein.	0.669
A0A0E0GGB5	A0A0E0G0V4	VKc domain-containing protein.	Uncharacterized protein.	0.610