59 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FK01	Uncharacterized protein. (1097 aa)
	A0A0E0FMK5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1218 aa)
	A0A0E0FQI2	F-box domain-containing protein. (366 aa)
	A0A0E0FU17	Uncharacterized protein. (1181 aa)
	A0A0E0FXC1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1618 aa)
	A0A0E0FZA5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1549 aa)
	A0A0E0G1B8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2156 aa)
	A0A0E0G1L4	Uncharacterized protein. (1377 aa)
	A0A0E0G1Z1	Uncharacterized protein. (871 aa)
	A0A0E0G4L3	F-box domain-containing protein. (521 aa)
	A0A0E0G813	Suf domain-containing protein. (886 aa)
	A0A0E0G8Z6	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
	A0A0E0FJZ9	Uncharacterized protein; Belongs to the argonaute family. (806 aa)
	A0A0E0GB51	Uncharacterized protein; Belongs to the argonaute family. (1047 aa)
	A0A0E0GB96	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1883 aa)
	A0A0E0GCG6	RPOL4c domain-containing protein. (251 aa)
	A0A0E0GDF7	Uncharacterized protein. (1152 aa)
	A0A0E0GFC8	Uncharacterized protein. (894 aa)
	A0A0E0GFM7	Cleavage and polyadenylation specificity factor subunit 2. (925 aa)
	A0A0E0GH34	Uncharacterized protein. (1054 aa)
	A0A0E0GJS9	Piwi domain-containing protein. (758 aa)
	A0A0E0GMG8	ArgoN domain-containing protein. (984 aa)
	A0A0E0GPJ0	Uncharacterized protein; Belongs to the argonaute family. (1056 aa)
	A0A0E0GQ43	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1411 aa)
	A0A0E0GRX1	Uncharacterized protein; Belongs to the argonaute family. (917 aa)
	A0A0E0GRX2	Piwi domain-containing protein. (986 aa)
	A0A0E0GUP8	Uncharacterized protein; Belongs to the argonaute family. (1325 aa)
	A0A0E0GV19	Uncharacterized protein; Belongs to the argonaute family. (1058 aa)
	A0A0E0GXJ0	Uncharacterized protein. (885 aa)
	A0A0E0H1Z1	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (127 aa)
	A0A0E0H314	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1523 aa)
	A0A0E0H4H0	Uncharacterized protein; Belongs to the argonaute family. (1210 aa)
	A0A0E0H4M5	RPOLA_N domain-containing protein. (1364 aa)
	A0A0E0H5Y4	Uncharacterized protein. (1990 aa)
	A0A0E0H6E1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1343 aa)
	A0A0E0H7P4	NYN domain-containing protein. (985 aa)
	A0A0E0HGV4	Uncharacterized protein. (386 aa)
	A0A0E0HLD6	Uncharacterized protein. (1675 aa)
	A0A0E0HLE0	Uncharacterized protein. (1688 aa)
	A0A0E0HQR5	Uncharacterized protein. (293 aa)
	A0A0E0HT43	Uncharacterized protein; Belongs to the argonaute family. (1035 aa)
	A0A0E0HUV0	RRM domain-containing protein. (99 aa)
	A0A0E0HVU8	Uncharacterized protein; Belongs to the argonaute family. (1019 aa)
	A0A0E0HWZ8	Uncharacterized protein. (948 aa)
	A0A0E0HXM8	Uncharacterized protein; Belongs to the argonaute family. (1042 aa)
	A0A0E0HZ13	Uncharacterized protein; Belongs to the argonaute family. (1026 aa)
	A0A0E0I0F0	Uncharacterized protein; Belongs to the argonaute family. (1056 aa)
	A0A0E0I1T6	Uncharacterized protein. (1287 aa)
	A0A0E0I4L6	NYN domain-containing protein. (653 aa)
	A0A0E0I635	Uncharacterized protein. (1146 aa)
	A0A0E0I7A5	Uncharacterized protein. (247 aa)
	A0A0E0I7N8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1244 aa)
	A0A0E0I8N9	Uncharacterized protein. (559 aa)
	A0A0E0IFV1	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (211 aa)
	A0A0E0IJJ9	DRBM domain-containing protein. (262 aa)
	A0A0E0ING2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1400 aa)
	A0A0E0IU73	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1570 aa)
	A0A0E0IW20	Uncharacterized protein. (1638 aa)
	A0A0E0J565	WD_REPEATS_REGION domain-containing protein. (323 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FJZ9	A0A0E0FU17	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.601
A0A0E0FJZ9	A0A0E0FXC1	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.672
A0A0E0FJZ9	A0A0E0FZA5	Uncharacterized protein; Belongs to the argonaute family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.849
A0A0E0FJZ9	A0A0E0G1B8	Uncharacterized protein; Belongs to the argonaute family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.849
A0A0E0FJZ9	A0A0E0G1L4	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.601
A0A0E0FJZ9	A0A0E0GB96	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.721
A0A0E0FJZ9	A0A0E0GCG6	Uncharacterized protein; Belongs to the argonaute family.	RPOL4c domain-containing protein.	0.482
A0A0E0FJZ9	A0A0E0GH34	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.429
A0A0E0FJZ9	A0A0E0GQ43	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.722
A0A0E0FJZ9	A0A0E0H314	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.672
A0A0E0FJZ9	A0A0E0H4M5	Uncharacterized protein; Belongs to the argonaute family.	RPOLA_N domain-containing protein.	0.590
A0A0E0FJZ9	A0A0E0H6E1	Uncharacterized protein; Belongs to the argonaute family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.508
A0A0E0FJZ9	A0A0E0I7A5	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.672
A0A0E0FJZ9	A0A0E0I7N8	Uncharacterized protein; Belongs to the argonaute family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.508
A0A0E0FJZ9	A0A0E0IJJ9	Uncharacterized protein; Belongs to the argonaute family.	DRBM domain-containing protein.	0.672
A0A0E0FJZ9	A0A0E0ING2	Uncharacterized protein; Belongs to the argonaute family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.590
A0A0E0FJZ9	A0A0E0IU73	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.672
A0A0E0FK01	A0A0E0FU17	Uncharacterized protein.	Uncharacterized protein.	0.601
A0A0E0FK01	A0A0E0FXC1	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.772
A0A0E0FK01	A0A0E0FZA5	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.849