11 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FNX5	Plus3 domain-containing protein. (681 aa)
	A0A0E0FXS7	Uncharacterized protein. (667 aa)
	A0A0E0GFX8	Uncharacterized protein. (1800 aa)
	A0A0E0GRF2	Uncharacterized protein. (358 aa)
	A0A0E0GTZ7	Uncharacterized protein. (606 aa)
	A0A0E0H4Z7	Uncharacterized protein. (1678 aa)
	A0A0E0I0I6	Uncharacterized protein. (1024 aa)
	A0A0E0I7E1	Uncharacterized protein. (786 aa)
	A0A0E0IMQ9	Uncharacterized protein. (1817 aa)
	A0A0E0J565	WD_REPEATS_REGION domain-containing protein. (323 aa)
	A0A0E0JBI1	Uncharacterized protein. (664 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FNX5	A0A0E0FXS7	Plus3 domain-containing protein.	Uncharacterized protein.	0.982
A0A0E0FNX5	A0A0E0GRF2	Plus3 domain-containing protein.	Uncharacterized protein.	0.991
A0A0E0FNX5	A0A0E0GTZ7	Plus3 domain-containing protein.	Uncharacterized protein.	0.982
A0A0E0FNX5	A0A0E0I0I6	Plus3 domain-containing protein.	Uncharacterized protein.	0.987
A0A0E0FNX5	A0A0E0I7E1	Plus3 domain-containing protein.	Uncharacterized protein.	0.990
A0A0E0FNX5	A0A0E0J565	Plus3 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.816
A0A0E0FNX5	A0A0E0JBI1	Plus3 domain-containing protein.	Uncharacterized protein.	0.982
A0A0E0FXS7	A0A0E0FNX5	Uncharacterized protein.	Plus3 domain-containing protein.	0.982
A0A0E0FXS7	A0A0E0GRF2	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0FXS7	A0A0E0I0I6	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A0E0FXS7	A0A0E0I7E1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0E0FXS7	A0A0E0J565	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.846
A0A0E0GRF2	A0A0E0FNX5	Uncharacterized protein.	Plus3 domain-containing protein.	0.991
A0A0E0GRF2	A0A0E0FXS7	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0GRF2	A0A0E0GTZ7	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0GRF2	A0A0E0I0I6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0E0GRF2	A0A0E0I7E1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0E0GRF2	A0A0E0J565	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.873
A0A0E0GRF2	A0A0E0JBI1	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0GTZ7	A0A0E0FNX5	Uncharacterized protein.	Plus3 domain-containing protein.	0.982