(25 nodes) Structural constituent of nuclear pore network (Oryza sativa f. spontanea)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0GJ56	Uncharacterized protein. (1367 aa)
	A0A0E0GHH3	Peptidase S59 domain-containing protein. (1005 aa)
	A0A0E0G3V8	Uncharacterized protein. (219 aa)
	A0A0E0G3F2	Uncharacterized protein. (1887 aa)
	A0A0E0G124	Uncharacterized protein. (241 aa)
	A0A0E0G120	DUF5311 domain-containing protein. (1476 aa)
	A0A0E0FVX5	Nsp1_C domain-containing protein. (227 aa)
	A0A0E0FT23	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (733 aa)
	A0A0E0FHZ0	Nuclear pore complex protein NUP35. (327 aa)
	A0A0E0JA13	Uncharacterized protein. (1030 aa)
	A0A0E0J766	Uncharacterized protein. (1888 aa)
	A0A0E0J4X4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1088 aa)
	A0A0E0IUG9	Nup54 domain-containing protein. (410 aa)
	A0A0E0ITL4	Nuclear pore complex protein NUP35. (331 aa)
	A0A0E0IRN9	Uncharacterized protein. (1274 aa)
	A0A0E0IPK9	Uncharacterized protein. (1702 aa)
	A0A0E0IBV5	Peptidase S59 domain-containing protein. (528 aa)
	A0A0E0I5U6	Uncharacterized protein. (1731 aa)
	A0A0E0HPH2	Nucleoporin_N domain-containing protein. (1233 aa)
	A0A0E0HLE5	TPR_MLP1_2 domain-containing protein. (2009 aa)
	A0A0E0HJZ2	Uncharacterized protein. (87 aa)
	A0A0E0H5R2	Uncharacterized protein. (854 aa)
	A0A0E0GUN9	Uncharacterized protein. (1358 aa)
	A0A0E0GNB4	Uncharacterized protein. (496 aa)
	A0A0E0GMD9	Uncharacterized protein. (1010 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FHZ0	A0A0E0FT23	Nuclear pore complex protein NUP35.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.939
A0A0E0FHZ0	A0A0E0FVX5	Nuclear pore complex protein NUP35.	Nsp1_C domain-containing protein.	0.959
A0A0E0FHZ0	A0A0E0G120	Nuclear pore complex protein NUP35.	DUF5311 domain-containing protein.	0.946
A0A0E0FHZ0	A0A0E0G124	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.946
A0A0E0FHZ0	A0A0E0G3F2	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.965
A0A0E0FHZ0	A0A0E0G3V8	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.864
A0A0E0FHZ0	A0A0E0GHH3	Nuclear pore complex protein NUP35.	Peptidase S59 domain-containing protein.	0.881
A0A0E0FHZ0	A0A0E0GMD9	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.982
A0A0E0FHZ0	A0A0E0GUN9	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.865
A0A0E0FHZ0	A0A0E0H5R2	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.958
A0A0E0FHZ0	A0A0E0HJZ2	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.980
A0A0E0FHZ0	A0A0E0HLE5	Nuclear pore complex protein NUP35.	TPR_MLP1_2 domain-containing protein.	0.596
A0A0E0FHZ0	A0A0E0HPH2	Nuclear pore complex protein NUP35.	Nucleoporin_N domain-containing protein.	0.990
A0A0E0FHZ0	A0A0E0IBV5	Nuclear pore complex protein NUP35.	Peptidase S59 domain-containing protein.	0.864
A0A0E0FHZ0	A0A0E0IPK9	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.959
A0A0E0FHZ0	A0A0E0IRN9	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.959
A0A0E0FHZ0	A0A0E0ITL4	Nuclear pore complex protein NUP35.	Nuclear pore complex protein NUP35.	0.881
A0A0E0FHZ0	A0A0E0IUG9	Nuclear pore complex protein NUP35.	Nup54 domain-containing protein.	0.969
A0A0E0FHZ0	A0A0E0J4X4	Nuclear pore complex protein NUP35.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.959
A0A0E0FHZ0	A0A0E0J766	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.864