19 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FM38	Uncharacterized protein. (1371 aa)
	A0A0E0GCG6	RPOL4c domain-containing protein. (251 aa)
	A0A0E0GFX8	Uncharacterized protein. (1800 aa)
	A0A0E0GJA1	Uncharacterized protein. (1748 aa)
	A0A0E0GMB6	Uncharacterized protein. (902 aa)
	A0A0E0GUZ4	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1529 aa)
	A0A0E0GZP9	Uncharacterized protein. (761 aa)
	A0A0E0H4Z7	Uncharacterized protein. (1678 aa)
	A0A0E0H898	Uncharacterized protein. (783 aa)
	A0A0E0HXG6	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1571 aa)
	A0A0E0I8P7	Uncharacterized protein. (345 aa)
	A0A0E0IAG8	Uncharacterized protein. (2705 aa)
	A0A0E0IDZ8	Uncharacterized protein. (852 aa)
	A0A0E0IMQ9	Uncharacterized protein. (1817 aa)
	A0A0E0INW7	Uncharacterized protein. (1412 aa)
	A0A0E0INX5	Uncharacterized protein. (856 aa)
	A0A0E0IX22	SAM-dependent MTase DRM-type domain-containing protein. (421 aa)
	A0A0E0J4V9	Uncharacterized protein. (846 aa)
	A0A0E0J5Z3	Uncharacterized protein. (734 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0GJA1	A0A0E0INW7	Uncharacterized protein.	Uncharacterized protein.	0.829
A0A0E0GUZ4	A0A0E0GZP9	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.649
A0A0E0GUZ4	A0A0E0H898	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.641
A0A0E0GUZ4	A0A0E0INW7	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.883
A0A0E0GUZ4	A0A0E0INX5	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.665
A0A0E0GZP9	A0A0E0GUZ4	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.649
A0A0E0GZP9	A0A0E0HXG6	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.650
A0A0E0GZP9	A0A0E0INW7	Uncharacterized protein.	Uncharacterized protein.	0.444
A0A0E0GZP9	A0A0E0INX5	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A0E0GZP9	A0A0E0J4V9	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A0E0H898	A0A0E0GUZ4	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.641
A0A0E0H898	A0A0E0HXG6	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.643
A0A0E0H898	A0A0E0INX5	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A0E0H898	A0A0E0J4V9	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A0E0HXG6	A0A0E0GZP9	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.650
A0A0E0HXG6	A0A0E0H898	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.643
A0A0E0HXG6	A0A0E0INW7	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.882
A0A0E0HXG6	A0A0E0INX5	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Uncharacterized protein.	0.873
A0A0E0INW7	A0A0E0GJA1	Uncharacterized protein.	Uncharacterized protein.	0.829
A0A0E0INW7	A0A0E0GUZ4	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.883