(30 nodes) Nitrate assimilation network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FN44	Uncharacterized protein. (566 aa)
	A0A0E0HG80	AMPKBI domain-containing protein. (290 aa)
	A0A0E0HCY0	Uncharacterized protein. (584 aa)
	A0A0E0H701	Uncharacterized protein. (631 aa)
	A0A0E0H268	High-affinity nitrate transporter; Involved in nitrate transport. (210 aa)
	A0A0E0I7C7	Uncharacterized protein. (642 aa)
	A0A0E0I7X9	Uncharacterized protein. (356 aa)
	A0A0E0ID56	Uncharacterized protein. (609 aa)
	A0A0E0ID59	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (916 aa)
	A0A0E0IPL5	TF-B3 domain-containing protein. (245 aa)
	A0A0E0IWB2	Uncharacterized protein. (596 aa)
	A0A0E0H1T9	Uncharacterized protein. (594 aa)
	A0A0E0GZS3	Uncharacterized protein. (493 aa)
	A0A0E0GLM9	AMPKBI domain-containing protein. (295 aa)
	A0A0E0GFK5	Uncharacterized protein. (589 aa)
	A0A0E0GDD5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (893 aa)
	A0A0E0GCC3	Uncharacterized protein. (615 aa)
	A0A0E0G9A1	High-affinity nitrate transporter; Involved in nitrate transport. (206 aa)
	A0A0E0G8V2	Uncharacterized protein. (680 aa)
	A0A0E0G019	Uncharacterized protein. (348 aa)
	A0A0E0G018	Uncharacterized protein. (533 aa)
	A0A0E0FZ56	Uncharacterized protein. (663 aa)
	A0A0E0FXQ8	Uncharacterized protein. (435 aa)
	A0A0E0FXH3	Uncharacterized protein. (231 aa)
	A0A0E0FRU6	Uncharacterized protein. (516 aa)
	A0A0E0I5X0	AMPKBI domain-containing protein. (316 aa)
	A0A0E0FMY4	Uncharacterized protein. (482 aa)
	A0A0E0FLI4	Uncharacterized protein. (85 aa)
	A0A0E0FLI3	Uncharacterized protein. (98 aa)
	A0A0E0FLH8	Uncharacterized protein. (803 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FLH8	A0A0E0FMY4	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A0E0FLH8	A0A0E0FRU6	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A0E0FLH8	A0A0E0G018	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A0E0FLH8	A0A0E0G019	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A0E0FLH8	A0A0E0GDD5	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.969
A0A0E0FLH8	A0A0E0ID56	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A0E0FLH8	A0A0E0ID59	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.969
A0A0E0FLI3	A0A0E0FMY4	Uncharacterized protein.	Uncharacterized protein.	0.685
A0A0E0FLI3	A0A0E0FRU6	Uncharacterized protein.	Uncharacterized protein.	0.685
A0A0E0FLI3	A0A0E0G018	Uncharacterized protein.	Uncharacterized protein.	0.685
A0A0E0FLI3	A0A0E0G019	Uncharacterized protein.	Uncharacterized protein.	0.685
A0A0E0FLI3	A0A0E0GDD5	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.969
A0A0E0FLI3	A0A0E0ID56	Uncharacterized protein.	Uncharacterized protein.	0.969
A0A0E0FLI3	A0A0E0ID59	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.969
A0A0E0FLI4	A0A0E0FMY4	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A0E0FLI4	A0A0E0FRU6	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A0E0FLI4	A0A0E0G018	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A0E0FLI4	A0A0E0G019	Uncharacterized protein.	Uncharacterized protein.	0.908
A0A0E0FLI4	A0A0E0GDD5	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.969
A0A0E0FLI4	A0A0E0ID56	Uncharacterized protein.	Uncharacterized protein.	0.969