(18 nodes) 3-5 DNA helicase activity network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0GDN3	Uncharacterized protein. (643 aa)
	A0A0E0GIY3	Uncharacterized protein. (2032 aa)
	A0A0E0GJ23	Uncharacterized protein. (102 aa)
	A0A0E0GJ24	Uncharacterized protein. (76 aa)
	A0A0E0GWH0	Uncharacterized protein. (726 aa)
	A0A0E0H115	Uncharacterized protein. (1043 aa)
	A0A0E0H2C3	Uncharacterized protein. (931 aa)
	A0A0E0H9G9	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (866 aa)
	A0A0E0I3H1	Uncharacterized protein. (1123 aa)
	A0A0E0IA66	Uncharacterized protein. (115 aa)
	A0A0E0IBH1	Uncharacterized protein. (1139 aa)
	A0A0E0IET7	Uncharacterized protein. (564 aa)
	A0A0E0J5B7	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (588 aa)
	A0A0E0J5M9	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (855 aa)
	A0A0E0J8G5	Uncharacterized protein. (2533 aa)
	A0A0E0FRJ6	Uncharacterized protein. (747 aa)
	A0A0E0G016	Uncharacterized protein. (934 aa)
	A0A0E0G0Y4	Uncharacterized protein. (658 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FRJ6	A0A0E0G0Y4	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0FRJ6	A0A0E0IBH1	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0G0Y4	A0A0E0FRJ6	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0G0Y4	A0A0E0GDN3	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0G0Y4	A0A0E0GWH0	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0G0Y4	A0A0E0H115	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0G0Y4	A0A0E0H2C3	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0G0Y4	A0A0E0H9G9	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.928
A0A0E0G0Y4	A0A0E0IA66	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0G0Y4	A0A0E0IET7	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0G0Y4	A0A0E0J5B7	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.928
A0A0E0G0Y4	A0A0E0J5M9	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.414
A0A0E0G0Y4	A0A0E0J8G5	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0GDN3	A0A0E0G0Y4	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0GDN3	A0A0E0H115	Uncharacterized protein.	Uncharacterized protein.	0.940
A0A0E0GDN3	A0A0E0IBH1	Uncharacterized protein.	Uncharacterized protein.	0.928
A0A0E0GDN3	A0A0E0J5M9	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.712
A0A0E0GWH0	A0A0E0G0Y4	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0GWH0	A0A0E0IBH1	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0H115	A0A0E0G0Y4	Uncharacterized protein.	Uncharacterized protein.	0.928