29 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FL51	Uncharacterized protein. (300 aa)
	A0A0E0FRZ9	WD_REPEATS_REGION domain-containing protein. (506 aa)
	A0A0E0GCY9	SWIRM domain-containing protein. (849 aa)
	A0A0E0GD08	Uncharacterized protein. (488 aa)
	A0A0E0GIR7	WD_REPEATS_REGION domain-containing protein. (570 aa)
	A0A0E0GRF2	Uncharacterized protein. (358 aa)
	A0A0E0GT42	WD_REPEATS_REGION domain-containing protein. (435 aa)
	A0A0E0HHL7	WD_REPEATS_REGION domain-containing protein. (248 aa)
	A0A0E0HKV5	Uncharacterized protein. (711 aa)
	A0A0E0HKV9	B30.2/SPRY domain-containing protein. (420 aa)
	A0A0E0HSU8	Uncharacterized protein. (100 aa)
	A0A0E0HSW0	Uncharacterized protein. (98 aa)
	A0A0E0HSW2	Uncharacterized protein. (388 aa)
	A0A0E0HVJ5	Uncharacterized protein. (493 aa)
	A0A0E0HYJ8	Uncharacterized protein. (221 aa)
	A0A0E0I2L0	WD_REPEATS_REGION domain-containing protein. (338 aa)
	A0A0E0I320	WD_REPEATS_REGION domain-containing protein. (466 aa)
	A0A0E0I765	SWIRM domain-containing protein. (785 aa)
	A0A0E0I7F6	Uncharacterized protein. (259 aa)
	A0A0E0I7V2	SET domain-containing protein. (2246 aa)
	A0A0E0IDD8	PWWP domain-containing protein. (517 aa)
	A0A0E0INI0	Histone-lysine N-methyltransferase. (1823 aa)
	A0A0E0INM4	BED-type domain-containing protein. (361 aa)
	A0A0E0IZ30	WD_REPEATS_REGION domain-containing protein. (438 aa)
	A0A0E0J273	Uncharacterized protein. (441 aa)
	A0A0E0J565	WD_REPEATS_REGION domain-containing protein. (323 aa)
	A0A0E0J5W0	Uncharacterized protein. (250 aa)
	A0A0E0J6L1	B30.2/SPRY domain-containing protein. (413 aa)
	A0A0E0JCD6	Uncharacterized protein. (1185 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FL51	A0A0E0GCY9	Uncharacterized protein.	SWIRM domain-containing protein.	0.627
A0A0E0FL51	A0A0E0GD08	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FL51	A0A0E0GIR7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.673
A0A0E0FL51	A0A0E0HSU8	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FL51	A0A0E0HSW0	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FL51	A0A0E0HSW2	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FL51	A0A0E0HVJ5	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FL51	A0A0E0I765	Uncharacterized protein.	SWIRM domain-containing protein.	0.630
A0A0E0FL51	A0A0E0I7V2	Uncharacterized protein.	SET domain-containing protein.	0.539
A0A0E0FL51	A0A0E0IDD8	Uncharacterized protein.	PWWP domain-containing protein.	0.539
A0A0E0FL51	A0A0E0INI0	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.539
A0A0E0FL51	A0A0E0J273	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FL51	A0A0E0J565	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.460
A0A0E0FL51	A0A0E0JCD6	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A0E0FRZ9	A0A0E0GCY9	WD_REPEATS_REGION domain-containing protein.	SWIRM domain-containing protein.	0.627
A0A0E0FRZ9	A0A0E0GD08	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.539
A0A0E0FRZ9	A0A0E0GIR7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.673
A0A0E0FRZ9	A0A0E0HSU8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.539
A0A0E0FRZ9	A0A0E0HSW0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.539
A0A0E0FRZ9	A0A0E0HSW2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.539