(85 nodes) Cytosolic large ribosomal subunit network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0IH19	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (171 aa)
	A0A0E0IJ46	Uncharacterized protein. (123 aa)
	A0A0E0IJH7	Uncharacterized protein. (119 aa)
	A0A0E0ILH5	Uncharacterized protein. (190 aa)
	A0A0E0ILY1	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (137 aa)
	A0A0E0ILZ1	DOMON domain-containing protein. (454 aa)
	A0A0E0ILZ3	Peptidylprolyl isomerase. (261 aa)
	A0A0E0IM55	Ribosomal_L7Ae domain-containing protein. (258 aa)
	A0A0E0IQF4	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (114 aa)
	A0A0E0IT66	Uncharacterized protein. (168 aa)
	A0A0E0IT77	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	A0A0E0IWL0	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	A0A0E0J198	TRASH domain-containing protein. (410 aa)
	A0A0E0J6R4	KOW domain-containing protein. (150 aa)
	A0A0E0J9Y5	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (108 aa)
	A0A0E0JBS9	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (222 aa)
	A0A0E0GM72	Uncharacterized protein. (204 aa)
	A0A0E0GM45	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (208 aa)
	A0A0E0GGL2	Uncharacterized protein. (164 aa)
	A0A0E0GF04	Ribosomal_L28e domain-containing protein. (147 aa)
	A0A0E0GES4	Uncharacterized protein. (135 aa)
	A0A0E0GE29	Uncharacterized protein. (101 aa)
	A0A0E0GD18	Uncharacterized protein. (1137 aa)
	A0A0E0GC79	Uncharacterized protein. (123 aa)
	A0A0E0GBP6	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	A0A0E0G959	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (219 aa)
	A0A0E0G6Y7	Uncharacterized protein. (123 aa)
	A0A0E0G4R4	Uncharacterized protein. (190 aa)
	A0A0E0G428	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (182 aa)
	A0A0E0G256	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (144 aa)
	A0A0E0G014	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	A0A0E0FZU7	Uncharacterized protein. (898 aa)
	A0A0E0FY67	Ribosomal_L7Ae domain-containing protein. (284 aa)
	A0A0E0FVM0	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (110 aa)
	A0A0E0FUT0	Ribosomal_L7Ae domain-containing protein. (112 aa)
	A0A0E0FRW8	Ribosomal_L28e domain-containing protein. (145 aa)
	A0A0E0FR75	Uncharacterized protein. (95 aa)
	A0A0E0FQP2	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)
	A0A0E0FM81	TRASH domain-containing protein. (203 aa)
	A0A0E0FLZ9	KOW domain-containing protein. (153 aa)
	A0A0E0FLC8	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
	A0A0E0FKQ7	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
	A0A0E0FK08	Ribosomal_L7Ae domain-containing protein. (136 aa)
	A0A0E0FJ28	Uncharacterized protein. (119 aa)
	A0A0E0FIA7	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (182 aa)
	A0A0E0FHF9	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	A0A0E0FG16	KOW domain-containing protein. (157 aa)
	A0A0E0HF91	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (129 aa)
	A0A0E0HFK0	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (255 aa)
	A0A0E0HGK7	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	A0A0E0HHK0	Ribosomal_L28e domain-containing protein. (147 aa)
	A0A0E0HI02	Uncharacterized protein. (165 aa)
	A0A0E0HIH7	Uncharacterized protein. (242 aa)
	A0A0E0HK23	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (208 aa)
	A0A0E0HL56	Uncharacterized protein. (227 aa)
	A0A0E0HLS5	Uncharacterized protein. (89 aa)
	A0A0E0HUY8	Uncharacterized protein. (119 aa)
	A0A0E0HW01	Uncharacterized protein. (337 aa)
	A0A0E0I219	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (121 aa)
	A0A0E0I3J8	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	A0A0E0I5H5	Uncharacterized protein. (116 aa)
	A0A0E0GP10	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	A0A0E0GUX4	Ribos_L4_asso_C domain-containing protein. (404 aa)
	A0A0E0H2J2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (206 aa)
	A0A0E0H2L1	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (208 aa)
	A0A0E0H2S7	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (167 aa)
	A0A0E0H5F4	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	A0A0E0H5N0	Uncharacterized protein. (271 aa)
	A0A0E0H9T4	Ribosomal_L18e/L15P domain-containing protein. (188 aa)
	A0A0E0HBS0	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	A0A0E0I5K8	Uncharacterized protein. (130 aa)
	A0A0E0I5L3	Ribosomal_L18e/L15P domain-containing protein. (195 aa)
	A0A0E0I6T6	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	A0A0E0I7D6	Uncharacterized protein. (126 aa)
	A0A0E0I8G5	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (105 aa)
	A0A0E0I8R0	Uncharacterized protein. (245 aa)
	A0A0E0I9A7	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (179 aa)
	A0A0E0IAA7	Ribosomal_L7Ae domain-containing protein. (269 aa)
	A0A0E0ICC0	Uncharacterized protein. (118 aa)
	A0A0E0IE60	Uncharacterized protein. (126 aa)
	A0A0E0IES5	Uncharacterized protein. (133 aa)
	A0A0E0HD75	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (116 aa)
	A0A0E0GM85	Uncharacterized protein. (131 aa)
	A0A0E0IEZ0	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (183 aa)
	A0A0E0IFR7	Uncharacterized protein. (211 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FG16	A0A0E0FHF9	KOW domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.969
A0A0E0FG16	A0A0E0FIA7	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.988
A0A0E0FG16	A0A0E0FJ28	KOW domain-containing protein.	Uncharacterized protein.	0.969
A0A0E0FG16	A0A0E0FK08	KOW domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.990
A0A0E0FG16	A0A0E0FKQ7	KOW domain-containing protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.993
A0A0E0FG16	A0A0E0FLC8	KOW domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.994
A0A0E0FG16	A0A0E0FLZ9	KOW domain-containing protein.	KOW domain-containing protein.	0.930
A0A0E0FG16	A0A0E0FM81	KOW domain-containing protein.	TRASH domain-containing protein.	0.886
A0A0E0FG16	A0A0E0FQP2	KOW domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.974
A0A0E0FG16	A0A0E0FR75	KOW domain-containing protein.	Uncharacterized protein.	0.993
A0A0E0FG16	A0A0E0FRW8	KOW domain-containing protein.	Ribosomal_L28e domain-containing protein.	0.989
A0A0E0FG16	A0A0E0FUT0	KOW domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.990
A0A0E0FG16	A0A0E0FVM0	KOW domain-containing protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.990
A0A0E0FG16	A0A0E0FY67	KOW domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.985
A0A0E0FG16	A0A0E0FZU7	KOW domain-containing protein.	Uncharacterized protein.	0.993
A0A0E0FG16	A0A0E0G014	KOW domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.989
A0A0E0FG16	A0A0E0G256	KOW domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.988
A0A0E0FG16	A0A0E0G428	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.988
A0A0E0FG16	A0A0E0G4R4	KOW domain-containing protein.	Uncharacterized protein.	0.989
A0A0E0FG16	A0A0E0G6Y7	KOW domain-containing protein.	Uncharacterized protein.	0.983