(80 nodes) B3 DNA binding domain network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0G106	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (1170 aa)
	A0A0E0FG19	Uncharacterized protein. (314 aa)
	A0A0E0FG21	Uncharacterized protein. (369 aa)
	A0A0E0FJ54	TF-B3 domain-containing protein. (467 aa)
	A0A0E0FJ74	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (708 aa)
	A0A0E0FQS7	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (714 aa)
	A0A0E0FRL4	Uncharacterized protein. (393 aa)
	A0A0E0FS59	TF-B3 domain-containing protein. (403 aa)
	A0A0E0FSH6	Uncharacterized protein. (401 aa)
	A0A0E0FSH8	TF-B3 domain-containing protein. (719 aa)
	A0A0E0FT97	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (742 aa)
	A0A0E0FWV9	Uncharacterized protein. (289 aa)
	A0A0E0FX86	Uncharacterized protein. (673 aa)
	A0A0E0FXG0	TF-B3 domain-containing protein. (727 aa)
	A0A0E0FY95	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (827 aa)
	A0A0E0G1S6	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (908 aa)
	A0A0E0G2D5	TF-B3 domain-containing protein. (237 aa)
	A0A0E0G5U9	TF-B3 domain-containing protein. (131 aa)
	A0A0E0G6A2	TF-B3 domain-containing protein. (267 aa)
	A0A0E0G6A3	TF-B3 domain-containing protein. (292 aa)
	A0A0E0G882	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (679 aa)
	A0A0E0G9E4	TF-B3 domain-containing protein. (279 aa)
	A0A0E0G9Z9	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (735 aa)
	A0A0E0GBA1	TF-B3 domain-containing protein. (308 aa)
	A0A0E0GD42	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (917 aa)
	A0A0E0GDC3	TF-B3 domain-containing protein. (1657 aa)
	A0A0E0GH75	TF-B3 domain-containing protein. (202 aa)
	A0A0E0GIN6	Uncharacterized protein. (1071 aa)
	A0A0E0GIW4	Uncharacterized protein. (539 aa)
	A0A0E0GQK2	Uncharacterized protein. (1601 aa)
	A0A0E0GQK3	Uncharacterized protein. (1134 aa)
	A0A0E0GQL1	Uncharacterized protein. (919 aa)
	A0A0E0GQL5	TF-B3 domain-containing protein. (173 aa)
	A0A0E0GQL7	Uncharacterized protein. (752 aa)
	A0A0E0GVS6	TF-B3 domain-containing protein. (111 aa)
	A0A0E0GVZ7	Uncharacterized protein. (846 aa)
	A0A0E0GVZ8	Uncharacterized protein. (354 aa)
	A0A0E0GW03	Uncharacterized protein. (366 aa)
	A0A0E0GZC2	Uncharacterized protein. (430 aa)
	A0A0E0GZC4	Uncharacterized protein. (429 aa)
	A0A0E0GZV7	TF-B3 domain-containing protein. (212 aa)
	A0A0E0H189	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (694 aa)
	A0A0E0H533	TF-B3 domain-containing protein. (400 aa)
	A0A0E0H738	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (1039 aa)
	A0A0E0H799	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (842 aa)
	A0A0E0H7G6	TF-B3 domain-containing protein. (433 aa)
	A0A0E0H833	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (523 aa)
	A0A0E0HGX0	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (699 aa)
	A0A0E0HHS8	Uncharacterized protein. (394 aa)
	A0A0E0HIF8	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (729 aa)
	A0A0E0HJQ4	TF-B3 domain-containing protein. (203 aa)
	A0A0E0HM37	TF-B3 domain-containing protein. (237 aa)
	A0A0E0HM59	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (1055 aa)
	A0A0E0HTU0	Uncharacterized protein. (362 aa)
	A0A0E0HUN9	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (720 aa)
	A0A0E0HV03	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (1127 aa)
	A0A0E0HVW9	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (698 aa)
	A0A0E0HXG9	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (728 aa)
	A0A0E0HXH0	TF-B3 domain-containing protein. (407 aa)
	A0A0E0HXH1	TF-B3 domain-containing protein. (437 aa)
	A0A0E0I2D6	Uncharacterized protein. (788 aa)
	A0A0E0I4G0	TF-B3 domain-containing protein. (284 aa)
	A0A0E0I5Q8	Uncharacterized protein. (949 aa)
	A0A0E0I674	TF-B3 domain-containing protein. (360 aa)
	A0A0E0I7E9	TF-B3 domain-containing protein. (286 aa)
	A0A0E0I7Z3	Uncharacterized protein. (406 aa)
	A0A0E0I9P1	Uncharacterized protein. (448 aa)
	A0A0E0IA98	Uncharacterized protein. (403 aa)
	A0A0E0IEP3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (1116 aa)
	A0A0E0IPL5	TF-B3 domain-containing protein. (245 aa)
	A0A0E0IQI6	Uncharacterized protein. (317 aa)
	A0A0E0IU22	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (698 aa)
	A0A0E0IVJ0	TF-B3 domain-containing protein. (312 aa)
	A0A0E0J2W6	TF-B3 domain-containing protein. (1357 aa)
	A0A0E0J326	Uncharacterized protein. (419 aa)
	A0A0E0J6Z5	TF-B3 domain-containing protein. (277 aa)
	A0A0E0J9W3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (853 aa)
	A0A0E0JA99	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (896 aa)
	A0A0E0JBJ9	TF-B3 domain-containing protein. (413 aa)
	A0A0E0JCE3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (899 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FG19	A0A0E0G2D5	Uncharacterized protein.	TF-B3 domain-containing protein.	0.497
A0A0E0FJ54	A0A0E0G106	TF-B3 domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.468
A0A0E0FJ54	A0A0E0HM59	TF-B3 domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.468
A0A0E0FJ54	A0A0E0HV03	TF-B3 domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.468
A0A0E0FJ74	A0A0E0H738	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.553
A0A0E0FJ74	A0A0E0IEP3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.451
A0A0E0FRL4	A0A0E0G2D5	Uncharacterized protein.	TF-B3 domain-containing protein.	0.457
A0A0E0FXG0	A0A0E0FY95	TF-B3 domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.482
A0A0E0FXG0	A0A0E0J9W3	TF-B3 domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.425
A0A0E0FXG0	A0A0E0JA99	TF-B3 domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.418
A0A0E0FY95	A0A0E0FXG0	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	TF-B3 domain-containing protein.	0.482
A0A0E0G106	A0A0E0FJ54	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	TF-B3 domain-containing protein.	0.468
A0A0E0G106	A0A0E0G9E4	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	TF-B3 domain-containing protein.	0.468
A0A0E0G1S6	A0A0E0H738	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.572
A0A0E0G1S6	A0A0E0IEP3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.432
A0A0E0G2D5	A0A0E0FG19	TF-B3 domain-containing protein.	Uncharacterized protein.	0.497
A0A0E0G2D5	A0A0E0FRL4	TF-B3 domain-containing protein.	Uncharacterized protein.	0.457
A0A0E0G6A2	A0A0E0H7G6	TF-B3 domain-containing protein.	TF-B3 domain-containing protein.	0.408
A0A0E0G6A2	A0A0E0HXH0	TF-B3 domain-containing protein.	TF-B3 domain-containing protein.	0.476
A0A0E0G6A2	A0A0E0HXH1	TF-B3 domain-containing protein.	TF-B3 domain-containing protein.	0.469