(15 nodes) KOW network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0HDG9	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	A0A0E0FLJ5	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
	A0A0E0FLZ9	KOW domain-containing protein. (153 aa)
	A0A0E0FZW8	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
	A0A0E0FZX5	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
	A0A0E0GDE9	Uncharacterized protein. (549 aa)
	A0A0E0GVU6	Uncharacterized protein. (330 aa)
	A0A0E0FG16	KOW domain-containing protein. (157 aa)
	A0A0E0J6R4	KOW domain-containing protein. (150 aa)
	A0A0E0IY18	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (159 aa)
	A0A0E0IWL0	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	A0A0E0ILY1	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (137 aa)
	A0A0E0HUM1	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (190 aa)
	A0A0E0HMK4	Transcription elongation factor SPT5. (1108 aa)
	A0A0E0HGJ9	Uncharacterized protein. (1569 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FG16	A0A0E0FLJ5	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FG16	A0A0E0FLZ9	KOW domain-containing protein.	KOW domain-containing protein.	0.930
A0A0E0FG16	A0A0E0FZW8	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FG16	A0A0E0FZX5	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FG16	A0A0E0HDG9	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FG16	A0A0E0ILY1	KOW domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.994
A0A0E0FG16	A0A0E0IWL0	KOW domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.994
A0A0E0FLJ5	A0A0E0FG16	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	KOW domain-containing protein.	0.927
A0A0E0FLJ5	A0A0E0FLZ9	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	KOW domain-containing protein.	0.927
A0A0E0FLJ5	A0A0E0HDG9	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.834
A0A0E0FLJ5	A0A0E0HUM1	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.841
A0A0E0FLJ5	A0A0E0ILY1	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.942
A0A0E0FLJ5	A0A0E0IWL0	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.942
A0A0E0FLJ5	A0A0E0J6R4	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	KOW domain-containing protein.	0.927
A0A0E0FLZ9	A0A0E0FG16	KOW domain-containing protein.	KOW domain-containing protein.	0.930
A0A0E0FLZ9	A0A0E0FLJ5	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FLZ9	A0A0E0FZW8	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FLZ9	A0A0E0FZX5	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FLZ9	A0A0E0HDG9	KOW domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.927
A0A0E0FLZ9	A0A0E0ILY1	KOW domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.994