(26 nodes) AMP-binding enzyme, C-terminal domain network (Oryza sativa f. spontanea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0GZ07	Uncharacterized protein. (555 aa)
	A0A0E0H0A3	Acetyl-coenzyme A synthetase. (747 aa)
	A0A0E0H7F0	Uncharacterized protein. (558 aa)
	A0A0E0H7X1	Uncharacterized protein. (518 aa)
	A0A0E0HJT6	Uncharacterized protein. (1148 aa)
	A0A0E0HUF6	Uncharacterized protein. (556 aa)
	A0A0E0I4N1	Uncharacterized protein. (591 aa)
	A0A0E0I6V5	Uncharacterized protein. (559 aa)
	A0A0E0I764	Uncharacterized protein. (591 aa)
	A0A0E0I943	Uncharacterized protein. (565 aa)
	A0A0E0ICP0	Uncharacterized protein. (539 aa)
	A0A0E0INH2	Uncharacterized protein. (577 aa)
	A0A0E0ISZ7	Uncharacterized protein. (621 aa)
	A0A0E0JAS3	Uncharacterized protein. (564 aa)
	A0A0E0FTG8	Uncharacterized protein. (598 aa)
	A0A0E0FX55	Uncharacterized protein. (1179 aa)
	A0A0E0G082	Uncharacterized protein. (630 aa)
	A0A0E0G2F4	Uncharacterized protein. (554 aa)
	A0A0E0G7K2	Acetyl-coenzyme A synthetase. (705 aa)
	A0A0E0GBN2	Uncharacterized protein. (535 aa)
	A0A0E0GG96	Uncharacterized protein. (578 aa)
	A0A0E0GGB9	Uncharacterized protein. (552 aa)
	A0A0E0GGD3	Uncharacterized protein. (1274 aa)
	A0A0E0GGX7	Uncharacterized protein. (583 aa)
	A0A0E0GLA8	Uncharacterized protein. (567 aa)
	A0A0E0GLA9	Uncharacterized protein. (574 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FTG8	A0A0E0G7K2	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.755
A0A0E0FTG8	A0A0E0H0A3	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.755
A0A0E0FTG8	A0A0E0HJT6	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A0E0FTG8	A0A0E0I6V5	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A0E0FX55	A0A0E0G7K2	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.755
A0A0E0FX55	A0A0E0H0A3	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.755
A0A0E0FX55	A0A0E0HJT6	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A0E0FX55	A0A0E0I6V5	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A0E0G082	A0A0E0G7K2	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.763
A0A0E0G082	A0A0E0GLA8	Uncharacterized protein.	Uncharacterized protein.	0.625
A0A0E0G082	A0A0E0GLA9	Uncharacterized protein.	Uncharacterized protein.	0.626
A0A0E0G082	A0A0E0H0A3	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.763
A0A0E0G082	A0A0E0HJT6	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A0E0G2F4	A0A0E0G7K2	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.755
A0A0E0G2F4	A0A0E0GBN2	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A0E0G2F4	A0A0E0H0A3	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.755
A0A0E0G2F4	A0A0E0HJT6	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A0E0G7K2	A0A0E0FTG8	Acetyl-coenzyme A synthetase.	Uncharacterized protein.	0.755
A0A0E0G7K2	A0A0E0FX55	Acetyl-coenzyme A synthetase.	Uncharacterized protein.	0.755
A0A0E0G7K2	A0A0E0G082	Acetyl-coenzyme A synthetase.	Uncharacterized protein.	0.763