119 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0I7T0	Sm domain-containing protein. (98 aa)
	A0A0E0FFC9	RanBP2-type domain-containing protein. (309 aa)
	A0A0E0FHY6	Uncharacterized protein. (913 aa)
	A0A0E0FJD3	Uncharacterized protein. (1716 aa)
	A0A0E0FJD8	Uncharacterized protein. (2088 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (133 aa)
	A0A0E0FNH0	Uncharacterized protein. (446 aa)
	A0A0E0FU17	Uncharacterized protein. (1181 aa)
	A0A0E0FUP6	NTP_transf_2 domain-containing protein. (522 aa)
	A0A0E0FVN9	Uncharacterized protein. (627 aa)
	A0A0E0FVP2	Uncharacterized protein. (512 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
	A0A0E0FWU6	KH_dom_type_1 domain-containing protein. (239 aa)
	A0A0E0FZH0	Uncharacterized protein. (377 aa)
	A0A0E0G0C1	Uncharacterized protein. (597 aa)
	A0A0E0G162	Uncharacterized protein; Belongs to the DEAD box helicase family. (414 aa)
	A0A0E0G1L4	Uncharacterized protein. (1377 aa)
	A0A0E0G554	Uncharacterized protein. (315 aa)
	A0A0E0G5B0	Uncharacterized protein. (295 aa)
	A0A0E0G6R2	Uncharacterized protein. (435 aa)
	A0A0E0G823	Uncharacterized protein. (449 aa)
	A0A0E0G8V1	RING-type domain-containing protein. (356 aa)
	A0A0E0GA64	Uncharacterized protein. (633 aa)
	A0A0E0GAB7	Uncharacterized protein; Belongs to the DEAD box helicase family. (508 aa)
	A0A0E0GCG3	Uncharacterized protein. (1365 aa)
	A0A0E0GCW3	NOT2_3_5 domain-containing protein. (704 aa)
	A0A0E0GCX8	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1059 aa)
	A0A0E0GDQ4	J domain-containing protein. (971 aa)
	A0A0E0GE21	Uncharacterized protein. (293 aa)
	A0A0E0GET2	EXOSC1 domain-containing protein. (152 aa)
	A0A0E0GFJ5	Uncharacterized protein. (1975 aa)
	A0A0E0GFX0	DUF1618 domain-containing protein. (534 aa)
	A0A0E0GG90	Uncharacterized protein; Belongs to the RNR ribonuclease family. (905 aa)
	A0A0E0GJ37	Uncharacterized protein. (573 aa)
	A0A0E0GK61	Uncharacterized protein. (487 aa)
	A0A0E0GNZ7	Uncharacterized protein. (342 aa)
	A0A0E0GQZ3	Uncharacterized protein. (859 aa)
	A0A0E0GR57	Uncharacterized protein. (779 aa)
	A0A0E0GR61	Uncharacterized protein. (550 aa)
	A0A0E0GTI9	Uncharacterized protein. (322 aa)
	A0A0E0GUA9	Uncharacterized protein. (208 aa)
	A0A0E0GUK0	Uncharacterized protein. (329 aa)
	A0A0E0GW47	Uncharacterized protein. (478 aa)
	A0A0E0GWC3	Uncharacterized protein. (434 aa)
	A0A0E0GWQ1	RNase_PH domain-containing protein. (238 aa)
	A0A0E0GWQ3	RNase III domain-containing protein. (176 aa)
	A0A0E0GZX6	Sm domain-containing protein. (97 aa)
	A0A0E0H1E6	Uncharacterized protein. (133 aa)
	A0A0E0H1T3	RING-type domain-containing protein. (348 aa)
	A0A0E0H1U3	Uncharacterized protein. (1048 aa)
	A0A0E0H1W9	Uncharacterized protein. (727 aa)
	A0A0E0H2J0	CRM domain-containing protein. (479 aa)
	A0A0E0H3I6	Uncharacterized protein; Belongs to the DEAD box helicase family. (480 aa)
	A0A0E0H440	Tr-type G domain-containing protein. (680 aa)
	A0A0E0H5V8	Uncharacterized protein. (132 aa)
	A0A0E0H6U4	Uncharacterized protein. (289 aa)
	A0A0E0H7I1	Uncharacterized protein. (736 aa)
	A0A0E0H7Y3	Uncharacterized protein. (329 aa)
	A0A0E0H9B0	CRM domain-containing protein. (560 aa)
	A0A0E0H9P0	NOT2_3_5 domain-containing protein. (813 aa)
	A0A0E0HC16	Uncharacterized protein. (306 aa)
	A0A0E0HC87	Uncharacterized protein. (1272 aa)
	A0A0E0HCK3	F-box domain-containing protein. (405 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
	A0A0E0HE23	Uncharacterized protein. (431 aa)
	A0A0E0HH73	RRM domain-containing protein. (868 aa)
	A0A0E0HHU9	Uncharacterized protein. (801 aa)
	A0A0E0HKM8	Uncharacterized protein. (337 aa)
	A0A0E0HLI0	DUF1618 domain-containing protein. (625 aa)
	A0A0E0HPD3	Uncharacterized protein. (1364 aa)
	A0A0E0HPG3	CRM domain-containing protein. (338 aa)
	A0A0E0HQ79	Uncharacterized protein. (270 aa)
	A0A0E0HUY0	Uncharacterized protein; Belongs to the DEAD box helicase family. (453 aa)
	A0A0E0HVI5	START domain-containing protein. (415 aa)
	A0A0E0HVX2	S1 domain-containing protein. (315 aa)
	A0A0E0HX48	Uncharacterized protein. (361 aa)
	A0A0E0HYU9	WH1 domain-containing protein. (382 aa)
	A0A0E0I4G6	WH1 domain-containing protein. (602 aa)
	A0A0E0I6L9	Uncharacterized protein. (262 aa)
	A0A0E0IAP9	Uncharacterized protein. (741 aa)
	A0A0E0ICH8	Uncharacterized protein. (540 aa)
	A0A0E0ICH9	Uncharacterized protein. (288 aa)
	A0A0E0ICP8	Uncharacterized protein. (857 aa)
	A0A0E0IFT7	NTP_transf_2 domain-containing protein. (580 aa)
	A0A0E0IGF4	Uncharacterized protein. (797 aa)
	A0A0E0IGV0	Uncharacterized protein. (298 aa)
	A0A0E0IIC5	Uncharacterized protein. (946 aa)
	A0A0E0IJK4	Uncharacterized protein. (280 aa)
	A0A0E0IKR4	Uncharacterized protein. (466 aa)
	A0A0E0IP80	Uncharacterized protein. (415 aa)
	A0A0E0IP85	Uncharacterized protein. (339 aa)
	A0A0E0IP88	Uncharacterized protein. (296 aa)
	A0A0E0IPA2	F-box domain-containing protein. (392 aa)
	A0A0E0IPB9	F-box domain-containing protein. (297 aa)
	A0A0E0IPC0	F-box domain-containing protein. (409 aa)
	A0A0E0IQ97	Uncharacterized protein. (826 aa)
	A0A0E0IQD9	RNB domain-containing protein. (806 aa)
	A0A0E0IRA3	Sm domain-containing protein. (97 aa)
	A0A0E0IS74	Uncharacterized protein. (809 aa)
	A0A0E0IS86	Uncharacterized protein. (728 aa)
	A0A0E0IS88	Uncharacterized protein. (608 aa)
	A0A0E0IS94	Uncharacterized protein. (266 aa)
	A0A0E0IU35	Uncharacterized protein. (855 aa)
	A0A0E0IUY0	Uncharacterized protein; Belongs to the DEAD box helicase family. (535 aa)
	A0A0E0IV96	Uncharacterized protein. (360 aa)
	A0A0E0IW20	Uncharacterized protein. (1638 aa)
	A0A0E0IWD3	Uncharacterized protein. (2265 aa)
	A0A0E0IYB5	DUF4283 domain-containing protein. (225 aa)
	A0A0E0IYB8	Uncharacterized protein. (962 aa)
	A0A0E0J050	Uncharacterized protein. (442 aa)
	A0A0E0J3T5	Uncharacterized protein. (896 aa)
	A0A0E0J436	Uncharacterized protein. (242 aa)
	A0A0E0J4U4	Uncharacterized protein. (861 aa)
	A0A0E0J5R4	RING-type domain-containing protein. (221 aa)
	A0A0E0J6Y6	Uncharacterized protein. (374 aa)
	A0A0E0J7S1	Uncharacterized protein. (496 aa)
	A0A0E0J9F5	Uncharacterized protein. (329 aa)
	A0A0E0JBP3	Uncharacterized protein. (750 aa)
	A0A0E0JCD1	Uncharacterized protein. (925 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0E0FFC9	A0A0E0FU17	A0A0E0FFC9	A0A0E0FU17	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.833
A0A0E0FFC9	A0A0E0FWU6	A0A0E0FFC9	A0A0E0FWU6	RanBP2-type domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.969
A0A0E0FFC9	A0A0E0G1L4	A0A0E0FFC9	A0A0E0G1L4	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.833
A0A0E0FFC9	A0A0E0G823	A0A0E0FFC9	A0A0E0G823	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.974
A0A0E0FFC9	A0A0E0GCX8	A0A0E0FFC9	A0A0E0GCX8	RanBP2-type domain-containing protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.923
A0A0E0FFC9	A0A0E0GET2	A0A0E0FFC9	A0A0E0GET2	RanBP2-type domain-containing protein.	EXOSC1 domain-containing protein.	0.975
A0A0E0FFC9	A0A0E0GG90	A0A0E0FFC9	A0A0E0GG90	RanBP2-type domain-containing protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.923
A0A0E0FFC9	A0A0E0GWC3	A0A0E0FFC9	A0A0E0GWC3	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.918
A0A0E0FFC9	A0A0E0GWQ1	A0A0E0FFC9	A0A0E0GWQ1	RanBP2-type domain-containing protein.	RNase_PH domain-containing protein.	0.973
A0A0E0FFC9	A0A0E0H7I1	A0A0E0FFC9	A0A0E0H7I1	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.928
A0A0E0FFC9	A0A0E0HC16	A0A0E0FFC9	A0A0E0HC16	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.974
A0A0E0FFC9	A0A0E0HVX2	A0A0E0FFC9	A0A0E0HVX2	RanBP2-type domain-containing protein.	S1 domain-containing protein.	0.973
A0A0E0FFC9	A0A0E0I6L9	A0A0E0FFC9	A0A0E0I6L9	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.918
A0A0E0FFC9	A0A0E0IGV0	A0A0E0FFC9	A0A0E0IGV0	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.918
A0A0E0FFC9	A0A0E0IQD9	A0A0E0FFC9	A0A0E0IQD9	RanBP2-type domain-containing protein.	RNB domain-containing protein.	0.923
A0A0E0FFC9	A0A0E0IW20	A0A0E0FFC9	A0A0E0IW20	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.852
A0A0E0FFC9	A0A0E0J436	A0A0E0FFC9	A0A0E0J436	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.923
A0A0E0FFC9	A0A0E0J9F5	A0A0E0FFC9	A0A0E0J9F5	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.975
A0A0E0FHY6	A0A0E0FWU6	A0A0E0FHY6	A0A0E0FWU6	Uncharacterized protein.	KH_dom_type_1 domain-containing protein.	0.538
A0A0E0FHY6	A0A0E0G823	A0A0E0FHY6	A0A0E0G823	Uncharacterized protein.	Uncharacterized protein.	0.543