30 items (Oryza sativa f. spontanea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0J1E0	Uncharacterized protein. (309 aa)
	A0A0E0JC88	Uncharacterized protein. (271 aa)
	A0A0E0J9I4	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (304 aa)
	A0A0E0J1H3	Uncharacterized protein. (232 aa)
	A0A0E0J1G8	Uncharacterized protein. (211 aa)
	A0A0E0J1G3	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)
	A0A0E0J1G1	Uncharacterized protein. (167 aa)
	A0A0E0IHA5	Uncharacterized protein. (371 aa)
	A0A0E0IDC2	Uncharacterized protein. (247 aa)
	A0A0E0IAB8	Uncharacterized protein. (479 aa)
	A0A0E0I614	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (347 aa)
	A0A0E0I5V1	Uncharacterized protein. (347 aa)
	A0A0E0I5B5	Uncharacterized protein. (1525 aa)
	A0A0E0I2C1	Uncharacterized protein. (380 aa)
	A0A0E0HPC6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)
	A0A0E0HPC1	Uncharacterized protein. (928 aa)
	A0A0E0HPC0	Uncharacterized protein. (345 aa)
	A0A0E0H955	Uncharacterized protein. (300 aa)
	A0A0E0H3I2	Uncharacterized protein. (407 aa)
	A0A0E0H3I1	Uncharacterized protein. (330 aa)
	A0A0E0H3H8	Uncharacterized protein. (811 aa)
	A0A0E0H2A5	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (318 aa)
	A0A0E0GWJ5	Uncharacterized protein. (277 aa)
	A0A0E0GWA7	Uncharacterized protein. (371 aa)
	A0A0E0GKP8	Uncharacterized protein. (229 aa)
	A0A0E0GIB3	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (294 aa)
	A0A0E0GED6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (333 aa)
	A0A0E0G9N4	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)
	A0A0E0G727	Uncharacterized protein. (616 aa)
	A0A0E0FMV6	Uncharacterized protein. (75 aa)

Your Current Organism:

Oryza sativa f. spontanea

NCBI taxonomy Id: 4536
Other names: O. sativa f. spontanea, Oryza nivara, Oryza nivara S.D.Sharma & Shastry, Oryza sativa f. spontanea Roshev. nom. illeg.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0FMV6	A0A0E0H2A5	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.640
A0A0E0FMV6	A0A0E0HPC0	Uncharacterized protein.	Uncharacterized protein.	0.640
A0A0E0FMV6	A0A0E0HPC1	Uncharacterized protein.	Uncharacterized protein.	0.640
A0A0E0FMV6	A0A0E0HPC6	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.640
A0A0E0FMV6	A0A0E0IDC2	Uncharacterized protein.	Uncharacterized protein.	0.640
A0A0E0FMV6	A0A0E0J1E0	Uncharacterized protein.	Uncharacterized protein.	0.640
A0A0E0FMV6	A0A0E0J9I4	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.640
A0A0E0G727	A0A0E0GED6	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.421
A0A0E0G727	A0A0E0GKP8	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A0E0G727	A0A0E0GWJ5	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A0E0G727	A0A0E0H2A5	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.636
A0A0E0G727	A0A0E0HPC0	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0G727	A0A0E0HPC1	Uncharacterized protein.	Uncharacterized protein.	0.725
A0A0E0G727	A0A0E0HPC6	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.724
A0A0E0G727	A0A0E0I5B5	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0E0G727	A0A0E0I614	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.555
A0A0E0G727	A0A0E0IDC2	Uncharacterized protein.	Uncharacterized protein.	0.636
A0A0E0G727	A0A0E0J1E0	Uncharacterized protein.	Uncharacterized protein.	0.636
A0A0E0G727	A0A0E0J1G1	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A0E0G727	A0A0E0J1G3	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.516