(26 nodes) Mixed, incl. Endoplasmic reticulum vesicle transporter, and Lysine catabolism network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0JFT7	Uncharacterized protein. (606 aa)
	A0A0E0JHR8	Uncharacterized protein. (947 aa)
	A0A0E0JJI9	Stress-response A/B barrel domain-containing protein. (113 aa)
	A0A0E0JTX1	GIDA_assoc domain-containing protein. (748 aa)
	A0A0E0JXI8	AMP_N domain-containing protein. (506 aa)
	A0A0E0K9F6	Uncharacterized protein. (488 aa)
	A0A0E0KD14	VQ domain-containing protein. (214 aa)
	A0A0E0KD22	Uncharacterized protein. (417 aa)
	A0A0E0KI17	Uncharacterized protein. (278 aa)
	A0A0E0KJU5	Uncharacterized protein. (387 aa)
	A0A0E0KRC7	Uncharacterized protein. (386 aa)
	A0A0E0L442	Uncharacterized protein. (344 aa)
	A0A0E0L5T9	Stress-response A/B barrel domain-containing protein. (83 aa)
	A0A0E0L8L3	Uncharacterized protein. (397 aa)
	A0A0E0LED7	Uncharacterized protein; Belongs to the peptidase M24B family. (649 aa)
	A0A0E0LHA6	DAO domain-containing protein. (449 aa)
	A0A0E0LIC5	Uncharacterized protein; Belongs to the peptidase M24B family. (779 aa)
	A0A0E0LLG7	Thioredoxin domain-containing protein. (490 aa)
	A0A0E0LN59	Uncharacterized protein. (268 aa)
	A0A0E0LN61	Uncharacterized protein. (267 aa)
	A0A0E0LUR7	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (544 aa)
	A0A0E0M6L4	Uncharacterized protein. (438 aa)
	A0A0E0M751	Uncharacterized protein. (439 aa)
	A0A0E0M753	Uncharacterized protein. (433 aa)
	A0A0E0MHI2	Uncharacterized protein. (567 aa)
	A0A0E0MNM3	AMP_N domain-containing protein. (521 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JFT7	A0A0E0JHR8	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JFT7	A0A0E0JJI9	Uncharacterized protein.	Stress-response A/B barrel domain-containing protein.	0.666
A0A0E0JFT7	A0A0E0JTX1	Uncharacterized protein.	GIDA_assoc domain-containing protein.	0.959
A0A0E0JFT7	A0A0E0K9F6	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A0E0JFT7	A0A0E0KD22	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0E0JFT7	A0A0E0KJU5	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0E0JFT7	A0A0E0KRC7	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0E0JFT7	A0A0E0L442	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0E0JFT7	A0A0E0L5T9	Uncharacterized protein.	Stress-response A/B barrel domain-containing protein.	0.666
A0A0E0JFT7	A0A0E0L8L3	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JFT7	A0A0E0LHA6	Uncharacterized protein.	DAO domain-containing protein.	0.666
A0A0E0JFT7	A0A0E0LLG7	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.945
A0A0E0JFT7	A0A0E0LN59	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JFT7	A0A0E0LN61	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JFT7	A0A0E0M6L4	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JFT7	A0A0E0M751	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JFT7	A0A0E0M753	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JHR8	A0A0E0JFT7	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A0E0JHR8	A0A0E0JTX1	Uncharacterized protein.	GIDA_assoc domain-containing protein.	0.645
A0A0E0JHR8	A0A0E0JXI8	Uncharacterized protein.	AMP_N domain-containing protein.	0.670