(61 nodes) Mixed, incl. SNF2, N-terminal, and NuA4 histone acetyltransferase complex network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0JDY8	Uncharacterized protein. (165 aa)
	A0A0E0JG12	Uncharacterized protein. (378 aa)
	A0A0E0JHW8	BCNT-C domain-containing protein. (476 aa)
	A0A0E0JJ11	Uncharacterized protein; Belongs to the actin family. (401 aa)
	A0A0E0JKU9	Uncharacterized protein. (166 aa)
	A0A0E0JPH6	Uncharacterized protein. (1247 aa)
	A0A0E0JQR3	RuvB-like helicase; Belongs to the RuvB family. (455 aa)
	A0A0E0JTP3	Uncharacterized protein. (1298 aa)
	A0A0E0JUL6	Uncharacterized protein. (2167 aa)
	A0A0E0JX17	Uncharacterized protein. (74 aa)
	A0A0E0K0J4	Uncharacterized protein. (1081 aa)
	A0A0E0K2K9	Uncharacterized protein. (737 aa)
	A0A0E0K310	Uncharacterized protein. (1542 aa)
	A0A0E0K3T5	Uncharacterized protein. (2033 aa)
	A0A0E0K5J5	Uncharacterized protein. (913 aa)
	A0A0E0K5K8	Uncharacterized protein. (1366 aa)
	A0A0E0K8N8	PHD finger protein ING. (320 aa)
	A0A0E0K937	Histone H2A; Belongs to the histone H2A family. (77 aa)
	A0A0E0K972	Uncharacterized protein. (925 aa)
	A0A0E0KE42	HIT-type domain-containing protein. (175 aa)
	A0A0E0KG59	Uncharacterized protein. (818 aa)
	A0A0E0KIN6	Uncharacterized protein. (106 aa)
	A0A0E0KJ03	Uncharacterized protein. (279 aa)
	A0A0E0KLZ5	MRG domain-containing protein. (372 aa)
	A0A0E0KMT8	Uncharacterized protein. (1129 aa)
	A0A0E0KMU0	Uncharacterized protein; Belongs to the actin family. (560 aa)
	A0A0E0KNK7	YL1_C domain-containing protein. (133 aa)
	A0A0E0KT08	Uncharacterized protein. (76 aa)
	A0A0E0KTZ9	HMG box domain-containing protein. (132 aa)
	A0A0E0KVL3	Uncharacterized protein. (1054 aa)
	A0A0E0KXT6	Uncharacterized protein. (1273 aa)
	A0A0E0KY00	TPR_REGION domain-containing protein. (142 aa)
	A0A0E0L0W7	Uncharacterized protein. (456 aa)
	A0A0E0L247	Uncharacterized protein. (1356 aa)
	A0A0E0L552	DMAP1 domain-containing protein. (380 aa)
	A0A0E0L6K2	Uncharacterized protein. (1865 aa)
	A0A0E0L6Q2	Uncharacterized protein. (2369 aa)
	A0A0E0L7I2	Uncharacterized protein. (314 aa)
	A0A0E0L8S5	RuvB-like helicase. (390 aa)
	A0A0E0LCF9	FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (493 aa)
	A0A0E0LFP1	Uncharacterized protein. (339 aa)
	A0A0E0LFX0	HMG box domain-containing protein. (157 aa)
	A0A0E0LIB5	Uncharacterized protein. (242 aa)
	A0A0E0LMN6	RuvB-like helicase. (334 aa)
	A0A0E0LNL1	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (443 aa)
	A0A0E0LNT5	Uncharacterized protein. (655 aa)
	A0A0E0LNZ0	Uncharacterized protein. (821 aa)
	A0A0E0LQ43	Uncharacterized protein. (1305 aa)
	A0A0E0LR12	Uncharacterized protein; Belongs to the actin family. (475 aa)
	A0A0E0LRK8	Hydrolase_4 domain-containing protein. (387 aa)
	A0A0E0LRU7	Uncharacterized protein. (2041 aa)
	A0A0E0LRY2	Uncharacterized protein. (1005 aa)
	A0A0E0LS49	YL1_C domain-containing protein. (364 aa)
	A0A0E0LST2	Uncharacterized protein. (867 aa)
	A0A0E0LTC6	Uncharacterized protein. (977 aa)
	A0A0E0LTZ8	Enhancer of polycomb-like protein. (451 aa)
	A0A0E0LZB2	Enhancer of polycomb-like protein. (490 aa)
	A0A0E0M9L0	Uncharacterized protein. (377 aa)
	A0A0E0MDH8	Enhancer of polycomb-like protein. (868 aa)
	A0A0E0MNJ6	PAPA-1 domain-containing protein. (539 aa)
	A0A0E0MP33	Uncharacterized protein. (250 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JDY8	A0A0E0JPH6	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A0E0JDY8	A0A0E0JQR3	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.987
A0A0E0JDY8	A0A0E0JTP3	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A0E0JDY8	A0A0E0K0J4	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A0E0JDY8	A0A0E0K2K9	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0JDY8	A0A0E0K310	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0JDY8	A0A0E0K3T5	Uncharacterized protein.	Uncharacterized protein.	0.738
A0A0E0JDY8	A0A0E0K5J5	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0JDY8	A0A0E0K5K8	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A0E0JDY8	A0A0E0K972	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0JDY8	A0A0E0KMT8	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A0E0JDY8	A0A0E0KMU0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.983
A0A0E0JDY8	A0A0E0KNK7	Uncharacterized protein.	YL1_C domain-containing protein.	0.987
A0A0E0JDY8	A0A0E0KTZ9	Uncharacterized protein.	HMG box domain-containing protein.	0.806
A0A0E0JDY8	A0A0E0KVL3	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A0E0JDY8	A0A0E0KXT6	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0E0JDY8	A0A0E0KY00	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.922
A0A0E0JDY8	A0A0E0L0W7	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0JDY8	A0A0E0L247	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A0E0JDY8	A0A0E0L6K2	Uncharacterized protein.	Uncharacterized protein.	0.792