(15 nodes) Mixed, incl. Swr1 complex, and RNA binding activity-knot of a chromodomain network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0JG12	Uncharacterized protein. (378 aa)
	A0A0E0JHW8	BCNT-C domain-containing protein. (476 aa)
	A0A0E0K3T5	Uncharacterized protein. (2033 aa)
	A0A0E0K937	Histone H2A; Belongs to the histone H2A family. (77 aa)
	A0A0E0KE42	HIT-type domain-containing protein. (175 aa)
	A0A0E0KIN6	Uncharacterized protein. (106 aa)
	A0A0E0KLZ5	MRG domain-containing protein. (372 aa)
	A0A0E0L552	DMAP1 domain-containing protein. (380 aa)
	A0A0E0L7I2	Uncharacterized protein. (314 aa)
	A0A0E0LFP1	Uncharacterized protein. (339 aa)
	A0A0E0LMN6	RuvB-like helicase. (334 aa)
	A0A0E0LNL1	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (443 aa)
	A0A0E0LS49	YL1_C domain-containing protein. (364 aa)
	A0A0E0LTZ8	Enhancer of polycomb-like protein. (451 aa)
	A0A0E0LZB2	Enhancer of polycomb-like protein. (490 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JG12	A0A0E0K3T5	Uncharacterized protein.	Uncharacterized protein.	0.915
A0A0E0JG12	A0A0E0K937	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.656
A0A0E0JG12	A0A0E0KLZ5	Uncharacterized protein.	MRG domain-containing protein.	0.909
A0A0E0JG12	A0A0E0L552	Uncharacterized protein.	DMAP1 domain-containing protein.	0.949
A0A0E0JG12	A0A0E0L7I2	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A0E0JG12	A0A0E0LFP1	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A0E0JG12	A0A0E0LMN6	Uncharacterized protein.	RuvB-like helicase.	0.881
A0A0E0JG12	A0A0E0LNL1	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.953
A0A0E0JG12	A0A0E0LS49	Uncharacterized protein.	YL1_C domain-containing protein.	0.884
A0A0E0JG12	A0A0E0LTZ8	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.897
A0A0E0JG12	A0A0E0LZB2	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.897
A0A0E0JHW8	A0A0E0K3T5	BCNT-C domain-containing protein.	Uncharacterized protein.	0.950
A0A0E0JHW8	A0A0E0K937	BCNT-C domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.915
A0A0E0JHW8	A0A0E0KE42	BCNT-C domain-containing protein.	HIT-type domain-containing protein.	0.889
A0A0E0JHW8	A0A0E0L552	BCNT-C domain-containing protein.	DMAP1 domain-containing protein.	0.965
A0A0E0JHW8	A0A0E0L7I2	BCNT-C domain-containing protein.	Uncharacterized protein.	0.635
A0A0E0JHW8	A0A0E0LFP1	BCNT-C domain-containing protein.	Uncharacterized protein.	0.635
A0A0E0JHW8	A0A0E0LMN6	BCNT-C domain-containing protein.	RuvB-like helicase.	0.896
A0A0E0JHW8	A0A0E0LS49	BCNT-C domain-containing protein.	YL1_C domain-containing protein.	0.903
A0A0E0K3T5	A0A0E0JG12	Uncharacterized protein.	Uncharacterized protein.	0.915