(16 nodes) Plasmodesmata-mediated intercellular transport network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0L0I0	Germin-like protein. (222 aa)
	A0A0E0L4G8	Thioredoxin; Belongs to the thioredoxin family. (121 aa)
	A0A0E0L7C5	WD_REPEATS_REGION domain-containing protein. (392 aa)
	A0A0E0JGD5	Germin-like protein. (227 aa)
	A0A0E0JTP1	Germin-like protein. (229 aa)
	A0A0E0K0U4	PAP2_C domain-containing protein. (440 aa)
	A0A0E0K2S4	Uncharacterized protein. (573 aa)
	A0A0E0K523	Uncharacterized protein. (1182 aa)
	A0A0E0K8L6	Uncharacterized protein. (361 aa)
	A0A0E0KAL5	Uncharacterized protein. (573 aa)
	A0A0E0KPK2	PAP2_C domain-containing protein. (1153 aa)
	A0A0E0KQL4	PAP2_C domain-containing protein. (431 aa)
	A0A0E0KQS5	Thioredoxin; Belongs to the thioredoxin family. (126 aa)
	A0A0E0KWY0	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (712 aa)
	A0A0E0LQ97	HMG box domain-containing protein; Belongs to the CTL (choline transporter-like) family. (848 aa)
	A0A0E0M2F6	Uncharacterized protein. (263 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0K2S4	A0A0E0K523	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0E0K2S4	A0A0E0L7C5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.576
A0A0E0K2S4	A0A0E0M2F6	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A0E0K523	A0A0E0K2S4	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0E0K523	A0A0E0KAL5	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0E0K523	A0A0E0L7C5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.544
A0A0E0K523	A0A0E0M2F6	Uncharacterized protein.	Uncharacterized protein.	0.581
A0A0E0KAL5	A0A0E0K523	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0E0KAL5	A0A0E0L7C5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.576
A0A0E0KAL5	A0A0E0M2F6	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A0E0KQS5	A0A0E0L4G8	Thioredoxin; Belongs to the thioredoxin family.	Thioredoxin; Belongs to the thioredoxin family.	0.649
A0A0E0L4G8	A0A0E0KQS5	Thioredoxin; Belongs to the thioredoxin family.	Thioredoxin; Belongs to the thioredoxin family.	0.649
A0A0E0L7C5	A0A0E0K2S4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.576
A0A0E0L7C5	A0A0E0K523	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.544
A0A0E0L7C5	A0A0E0KAL5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.576
A0A0E0M2F6	A0A0E0K2S4	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A0E0M2F6	A0A0E0K523	Uncharacterized protein.	Uncharacterized protein.	0.581
A0A0E0M2F6	A0A0E0KAL5	Uncharacterized protein.	Uncharacterized protein.	0.438