29 items (Oryza punctata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0KGU4	GCK domain-containing protein. (180 aa)
	A0A0E0KEW3	SPX domain-containing protein. (243 aa)
	A0A0E0KBW6	Uncharacterized protein. (275 aa)
	A0A0E0KBN0	Uncharacterized protein. (414 aa)
	A0A0E0K6N3	Uncharacterized protein. (791 aa)
	A0A0E0JX08	SPX domain-containing protein. (306 aa)
	A0A0E0KKZ5	SPX domain-containing protein. (326 aa)
	A0A0E0KVD0	Uncharacterized protein. (560 aa)
	A0A0E0L211	Epimerase domain-containing protein. (479 aa)
	A0A0E0LI06	WD_REPEATS_REGION domain-containing protein. (407 aa)
	A0A0E0JDW9	Glyco_trans_4-like_N domain-containing protein. (405 aa)
	A0A0E0JDK4	Uncharacterized protein. (552 aa)
	A0A0E0JDK3	Uncharacterized protein; Belongs to the multicopper oxidase family. (643 aa)
	A0A0E0JDK0	Uncharacterized protein. (1568 aa)
	A0A0E0JD84	Uncharacterized protein. (802 aa)
	A0A0E0L3H3	LNS2 domain-containing protein. (968 aa)
	A0A0E0L5L6	UBIQUITIN_CONJUGAT_2 domain-containing protein. (903 aa)
	A0A0E0LBU7	Uncharacterized protein. (839 aa)
	A0A0E0LDA1	SPX domain-containing protein. (305 aa)
	A0A0E0LG13	Uncharacterized protein. (485 aa)
	A0A0E0LHB6	GCK domain-containing protein. (200 aa)
	A0A0E0JNZ4	Uncharacterized protein. (1033 aa)
	A0A0E0LNA4	SPX domain-containing protein. (236 aa)
	A0A0E0LSV0	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (359 aa)
	A0A0E0M796	SPX domain-containing protein. (266 aa)
	A0A0E0MH72	LNS2 domain-containing protein. (1806 aa)
	A0A0E0L2C5	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1169 aa)
	A0A0E0L2C3	Uncharacterized protein. (530 aa)
	A0A0E0KKA0	WD_REPEATS_REGION domain-containing protein. (354 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JD84	A0A0E0L5L6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.418
A0A0E0JDW9	A0A0E0KBN0	Glyco_trans_4-like_N domain-containing protein.	Uncharacterized protein.	0.939
A0A0E0JDW9	A0A0E0L211	Glyco_trans_4-like_N domain-containing protein.	Epimerase domain-containing protein.	0.968
A0A0E0JDW9	A0A0E0L3H3	Glyco_trans_4-like_N domain-containing protein.	LNS2 domain-containing protein.	0.919
A0A0E0JDW9	A0A0E0LG13	Glyco_trans_4-like_N domain-containing protein.	Uncharacterized protein.	0.938
A0A0E0JDW9	A0A0E0MH72	Glyco_trans_4-like_N domain-containing protein.	LNS2 domain-containing protein.	0.867
A0A0E0K6N3	A0A0E0KKZ5	Uncharacterized protein.	SPX domain-containing protein.	0.441
A0A0E0K6N3	A0A0E0L211	Uncharacterized protein.	Epimerase domain-containing protein.	0.433
A0A0E0K6N3	A0A0E0L5L6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.550
A0A0E0K6N3	A0A0E0LG13	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0E0KBN0	A0A0E0JDW9	Uncharacterized protein.	Glyco_trans_4-like_N domain-containing protein.	0.939
A0A0E0KBN0	A0A0E0L211	Uncharacterized protein.	Epimerase domain-containing protein.	0.968
A0A0E0KBN0	A0A0E0L3H3	Uncharacterized protein.	LNS2 domain-containing protein.	0.872
A0A0E0KBN0	A0A0E0LG13	Uncharacterized protein.	Uncharacterized protein.	0.938
A0A0E0KBN0	A0A0E0MH72	Uncharacterized protein.	LNS2 domain-containing protein.	0.867
A0A0E0KKA0	A0A0E0L5L6	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.460
A0A0E0KKA0	A0A0E0LI06	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.873
A0A0E0KKZ5	A0A0E0K6N3	SPX domain-containing protein.	Uncharacterized protein.	0.441
A0A0E0KKZ5	A0A0E0L5L6	SPX domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.433
A0A0E0KVD0	A0A0E0L5L6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.404