(86 nodes) Organic acid binding network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0LTI4	Fe2OG dioxygenase domain-containing protein. (181 aa)
	A0A0E0MMG1	Uncharacterized protein. (619 aa)
	A0A0E0MLP5	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (531 aa)
	A0A0E0MG34	Uncharacterized protein; Belongs to the peptidase M24B family. (652 aa)
	A0A0E0MF97	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (512 aa)
	A0A0E0MEX5	Uncharacterized protein. (386 aa)
	A0A0E0MDB2	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (326 aa)
	A0A0E0MDB0	Uncharacterized protein. (602 aa)
	A0A0E0MB30	Uncharacterized protein. (209 aa)
	A0A0E0MA57	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (343 aa)
	A0A0E0M997	Fe2OG dioxygenase domain-containing protein. (323 aa)
	A0A0E0M617	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (927 aa)
	A0A0E0M1W8	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (322 aa)
	A0A0E0M1W7	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (321 aa)
	A0A0E0LXB0	Uncharacterized protein. (492 aa)
	A0A0E0LXA9	Uncharacterized protein. (412 aa)
	A0A0E0LVQ7	Uncharacterized protein. (444 aa)
	A0A0E0LSV0	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (359 aa)
	A0A0E0LQQ0	Uncharacterized protein. (469 aa)
	A0A0E0LJM8	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (543 aa)
	A0A0E0LIH2	Uncharacterized protein. (352 aa)
	A0A0E0LED7	Uncharacterized protein; Belongs to the peptidase M24B family. (649 aa)
	A0A0E0LCV7	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (293 aa)
	A0A0E0LCP4	Uncharacterized protein. (204 aa)
	A0A0E0LC75	Uncharacterized protein. (206 aa)
	A0A0E0LC74	Uncharacterized protein. (206 aa)
	A0A0E0LC64	Uncharacterized protein. (192 aa)
	A0A0E0L6S8	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (510 aa)
	A0A0E0L427	Uncharacterized protein. (314 aa)
	A0A0E0L3Q1	Uncharacterized protein. (220 aa)
	A0A0E0L2V8	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (438 aa)
	A0A0E0L2G0	Abhydrolase_3 domain-containing protein. (379 aa)
	A0A0E0L0U8	Uncharacterized protein. (239 aa)
	A0A0E0KZT3	Uncharacterized protein. (172 aa)
	A0A0E0KYW5	Uncharacterized protein. (432 aa)
	A0A0E0KYI1	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (311 aa)
	A0A0E0KYI0	DIOX_N domain-containing protein. (136 aa)
	A0A0E0KWH3	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (330 aa)
	A0A0E0KWG9	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (334 aa)
	A0A0E0KWC2	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (383 aa)
	A0A0E0KUB5	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (340 aa)
	A0A0E0KTK7	AA_kinase domain-containing protein. (871 aa)
	A0A0E0KRL5	Bet_v_1 domain-containing protein. (164 aa)
	A0A0E0KPY1	Lipoyl-binding domain-containing protein. (444 aa)
	A0A0E0KPW3	Uncharacterized protein. (473 aa)
	A0A0E0KP82	P4Hc domain-containing protein. (247 aa)
	A0A0E0KM36	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (325 aa)
	A0A0E0KKC8	Uncharacterized protein. (297 aa)
	A0A0E0KJC0	Fe2OG dioxygenase domain-containing protein. (308 aa)
	A0A0E0KIT9	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (489 aa)
	A0A0E0KIK1	Uncharacterized protein. (606 aa)
	A0A0E0KI17	Uncharacterized protein. (278 aa)
	A0A0E0KH70	Uncharacterized protein. (586 aa)
	A0A0E0KG44	Uncharacterized protein. (453 aa)
	A0A0E0KFU9	FTCD_N domain-containing protein. (324 aa)
	A0A0E0KF07	Uncharacterized protein. (452 aa)
	A0A0E0KCM5	Bet_v_1 domain-containing protein; Belongs to the BetVI family. (160 aa)
	A0A0E0KCJ7	Uncharacterized protein. (206 aa)
	A0A0E0KB97	Uncharacterized protein. (434 aa)
	A0A0E0KB22	Fe2OG dioxygenase domain-containing protein. (437 aa)
	A0A0E0K832	Fe2OG dioxygenase domain-containing protein. (196 aa)
	A0A0E0K802	P4Hc domain-containing protein. (355 aa)
	A0A0E0K5R6	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (331 aa)
	A0A0E0K451	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (368 aa)
	A0A0E0K1U4	Folate_rec domain-containing protein. (320 aa)
	A0A0E0K130	Uncharacterized protein. (560 aa)
	A0A0E0K0A6	Lipoyl-binding domain-containing protein. (389 aa)
	A0A0E0JY28	Uncharacterized protein. (205 aa)
	A0A0E0JY26	Uncharacterized protein. (199 aa)
	A0A0E0JXK3	Uncharacterized protein. (206 aa)
	A0A0E0JUF7	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (575 aa)
	A0A0E0JRP3	SHMT domain-containing protein. (598 aa)
	A0A0E0JQI5	Uncharacterized protein. (214 aa)
	A0A0E0JP59	Uncharacterized protein. (620 aa)
	A0A0E0JNG3	Uncharacterized protein. (195 aa)
	A0A0E0JN51	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1034 aa)
	A0A0E0JMX5	Uncharacterized protein. (168 aa)
	A0A0E0JJA1	Fe2OG dioxygenase domain-containing protein. (388 aa)
	A0A0E0JIZ1	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (373 aa)
	A0A0E0JHQ6	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (983 aa)
	A0A0E0JFX2	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (477 aa)
	A0A0E0JF87	Uncharacterized protein. (190 aa)
	A0A0E0JF86	Uncharacterized protein. (200 aa)
	A0A0E0JEX2	Fe2OG dioxygenase domain-containing protein. (466 aa)
	A0A0E0JEQ5	Uncharacterized protein. (816 aa)
	A0A0E0JEC6	Uncharacterized protein. (547 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JEC6	A0A0E0JHQ6	Uncharacterized protein.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.953
A0A0E0JEC6	A0A0E0JUF7	Uncharacterized protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.707
A0A0E0JEC6	A0A0E0K0A6	Uncharacterized protein.	Lipoyl-binding domain-containing protein.	0.746
A0A0E0JEC6	A0A0E0KPY1	Uncharacterized protein.	Lipoyl-binding domain-containing protein.	0.746
A0A0E0JEC6	A0A0E0KYW5	Uncharacterized protein.	Uncharacterized protein.	0.938
A0A0E0JEC6	A0A0E0L6S8	Uncharacterized protein.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.707
A0A0E0JEC6	A0A0E0LJM8	Uncharacterized protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.707
A0A0E0JEX2	A0A0E0KB22	Fe2OG dioxygenase domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.518
A0A0E0JFX2	A0A0E0JHQ6	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.661
A0A0E0JFX2	A0A0E0JN51	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.784
A0A0E0JFX2	A0A0E0JRP3	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	SHMT domain-containing protein.	0.485
A0A0E0JFX2	A0A0E0JUF7	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.648
A0A0E0JFX2	A0A0E0K0A6	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Lipoyl-binding domain-containing protein.	0.648
A0A0E0JFX2	A0A0E0KIT9	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.525
A0A0E0JFX2	A0A0E0KM36	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.847
A0A0E0JFX2	A0A0E0KPY1	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Lipoyl-binding domain-containing protein.	0.648
A0A0E0JFX2	A0A0E0L2V8	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.485
A0A0E0JFX2	A0A0E0L6S8	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.648
A0A0E0JFX2	A0A0E0LJM8	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.648
A0A0E0JFX2	A0A0E0MF97	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.485