(36 nodes) Defense response to virus network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0JP95	Uncharacterized protein. (445 aa)
	A0A0E0JJP5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1182 aa)
	A0A0E0JN12	Jacalin-type lectin domain-containing protein. (215 aa)
	A0A0E0JRE7	LEA_2 domain-containing protein. (239 aa)
	A0A0E0JRE8	LEA_2 domain-containing protein. (245 aa)
	A0A0E0JU64	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (260 aa)
	A0A0E0K2B5	Nuclear cap-binding protein subunit 2. (223 aa)
	A0A0E0K2K5	Photolyase/cryptochrome alpha/beta domain-containing protein. (662 aa)
	A0A0E0K4W7	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	A0A0E0K826	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1913 aa)
	A0A0E0K917	Uncharacterized protein. (957 aa)
	A0A0E0K9Z2	PUM-HD domain-containing protein. (640 aa)
	A0A0E0KA62	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	A0A0E0KDN3	MIF4G domain-containing protein. (848 aa)
	A0A0E0KFI5	Uncharacterized protein; Belongs to the argonaute family. (1105 aa)
	A0A0E0KL82	LEA_2 domain-containing protein. (212 aa)
	A0A0E0KL83	LEA_2 domain-containing protein. (210 aa)
	A0A0E0KMS0	Jacalin-type lectin domain-containing protein. (193 aa)
	A0A0E0KMS1	Jacalin-type lectin domain-containing protein. (121 aa)
	A0A0E0KN42	Jacalin-type lectin domain-containing protein. (439 aa)
	A0A0E0KSN2	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1536 aa)
	A0A0E0KX21	LEA_2 domain-containing protein. (205 aa)
	A0A0E0L0V4	LEA_2 domain-containing protein. (216 aa)
	A0A0E0LBL6	PEP_hydrolase domain-containing protein. (740 aa)
	A0A0E0LGP7	GYF domain-containing protein. (1577 aa)
	A0A0E0LHG6	Uncharacterized protein. (1551 aa)
	A0A0E0LJ01	LEA_2 domain-containing protein. (424 aa)
	A0A0E0LJ02	Uncharacterized protein. (213 aa)
	A0A0E0LQB1	Uncharacterized protein. (197 aa)
	A0A0E0M184	DRBM domain-containing protein. (236 aa)
	A0A0E0M2X5	PUM-HD domain-containing protein. (1002 aa)
	A0A0E0MHZ1	Uncharacterized protein. (220 aa)
	A0A0E0MJV8	LEA_2 domain-containing protein. (216 aa)
	A0A0E0MJV9	LEA_2 domain-containing protein. (191 aa)
	A0A0E0MKJ6	Uncharacterized protein. (609 aa)
	A0A0E0MKJ7	Uncharacterized protein. (659 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JJP5	A0A0E0JP95	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein.	0.435
A0A0E0JJP5	A0A0E0K826	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.612
A0A0E0JJP5	A0A0E0K917	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein.	0.432
A0A0E0JJP5	A0A0E0KFI5	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein; Belongs to the argonaute family.	0.490
A0A0E0JJP5	A0A0E0KSN2	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.541
A0A0E0JJP5	A0A0E0LHG6	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein.	0.457
A0A0E0JJP5	A0A0E0M184	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	DRBM domain-containing protein.	0.541
A0A0E0JJP5	A0A0E0MKJ6	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein.	0.586
A0A0E0JJP5	A0A0E0MKJ7	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	Uncharacterized protein.	0.586
A0A0E0JP95	A0A0E0JJP5	Uncharacterized protein.	RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family.	0.435
A0A0E0JP95	A0A0E0K826	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.550
A0A0E0JP95	A0A0E0KFI5	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.496
A0A0E0JP95	A0A0E0KSN2	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.803
A0A0E0JP95	A0A0E0LHG6	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A0E0JP95	A0A0E0M184	Uncharacterized protein.	DRBM domain-containing protein.	0.803
A0A0E0JP95	A0A0E0MKJ6	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0JP95	A0A0E0MKJ7	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0E0JU64	A0A0E0K2B5	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	Nuclear cap-binding protein subunit 2.	0.588
A0A0E0JU64	A0A0E0KDN3	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	MIF4G domain-containing protein.	0.872
A0A0E0JU64	A0A0E0LGP7	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	GYF domain-containing protein.	0.428