85 items (Oryza punctata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0M6D6	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (355 aa)
	A0A0E0JVT0	Polysacc_synt_4 domain-containing protein. (566 aa)
	A0A0E0JVT4	Uncharacterized protein. (604 aa)
	A0A0E0JYE9	Uncharacterized protein. (635 aa)
	A0A0E0K0F0	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (431 aa)
	A0A0E0K0L0	Uncharacterized protein. (482 aa)
	A0A0E0K140	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (655 aa)
	A0A0E0K5E4	Methyltransferase. (660 aa)
	A0A0E0K5J8	Uncharacterized protein. (1676 aa)
	A0A0E0K5L4	Uncharacterized protein. (604 aa)
	A0A0E0K5L6	Uncharacterized protein. (570 aa)
	A0A0E0K7M5	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (416 aa)
	A0A0E0K9S0	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (360 aa)
	A0A0E0KAE9	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (597 aa)
	A0A0E0KCB1	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (389 aa)
	A0A0E0KCE4	PMR5N domain-containing protein. (434 aa)
	A0A0E0KCE7	PMR5N domain-containing protein. (554 aa)
	A0A0E0KCM1	Uncharacterized protein. (448 aa)
	A0A0E0KCR1	Uncharacterized protein. (472 aa)
	A0A0E0KCR3	Uncharacterized protein. (415 aa)
	A0A0E0KCX6	Uncharacterized protein. (493 aa)
	A0A0E0KF26	COBRA-like protein; Belongs to the COBRA family. (458 aa)
	A0A0E0KFX1	Glycosyltransferase. (619 aa)
	A0A0E0KJ62	COBRA-like protein; Belongs to the COBRA family. (460 aa)
	A0A0E0KKQ4	PMR5N domain-containing protein. (495 aa)
	A0A0E0KM10	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (362 aa)
	A0A0E0KQ06	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (428 aa)
	A0A0E0KR81	Uncharacterized protein. (576 aa)
	A0A0E0KR83	Uncharacterized protein. (574 aa)
	A0A0E0KTC3	COBRA-like protein; Belongs to the COBRA family. (421 aa)
	A0A0E0KU72	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (473 aa)
	A0A0E0KW05	Polysacc_synt_4 domain-containing protein. (318 aa)
	A0A0E0KW09	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (448 aa)
	A0A0E0KXZ3	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (370 aa)
	A0A0E0L1D8	PMR5N domain-containing protein. (522 aa)
	A0A0E0L209	COBRA-like protein; Belongs to the COBRA family. (456 aa)
	A0A0E0L210	Glycosyltransferase. (352 aa)
	A0A0E0L237	Uncharacterized protein. (785 aa)
	A0A0E0L2S5	Uncharacterized protein. (726 aa)
	A0A0E0L3N2	PMR5N domain-containing protein. (499 aa)
	A0A0E0L5N3	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (452 aa)
	A0A0E0L678	Cas1_AcylT domain-containing protein. (521 aa)
	A0A0E0L984	Uncharacterized protein. (564 aa)
	A0A0E0L985	Uncharacterized protein. (1932 aa)
	A0A0E0L989	Uncharacterized protein. (264 aa)
	A0A0E0L991	Uncharacterized protein. (551 aa)
	A0A0E0L992	Uncharacterized protein. (587 aa)
	A0A0E0L995	Uncharacterized protein. (569 aa)
	A0A0E0L997	Uncharacterized protein. (284 aa)
	A0A0E0LBC3	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (554 aa)
	A0A0E0LEW5	Uncharacterized protein. (562 aa)
	A0A0E0LEW9	Polysacc_synt_4 domain-containing protein. (330 aa)
	A0A0E0LEX3	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (524 aa)
	A0A0E0LN23	COBRA-like protein; Belongs to the COBRA family. (451 aa)
	A0A0E0LN24	COBRA-like protein; Belongs to the COBRA family. (450 aa)
	A0A0E0LP86	Uncharacterized protein. (730 aa)
	A0A0E0LQ52	PMR5N domain-containing protein. (492 aa)
	A0A0E0LQ65	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (362 aa)
	A0A0E0LTX5	Uncharacterized protein. (596 aa)
	A0A0E0M0X1	PMR5N domain-containing protein. (295 aa)
	A0A0E0M211	Uncharacterized protein. (558 aa)
	A0A0E0M2Y9	Uncharacterized protein. (441 aa)
	A0A0E0M609	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (362 aa)
	A0A0E0JTZ5	t-SNARE coiled-coil homology domain-containing protein. (234 aa)
	A0A0E0M995	Uncharacterized protein. (380 aa)
	A0A0E0MA73	Uncharacterized protein. (352 aa)
	A0A0E0MBH3	Uncharacterized protein. (358 aa)
	A0A0E0MBJ4	Uncharacterized protein. (959 aa)
	A0A0E0MBL1	Uncharacterized protein. (357 aa)
	A0A0E0MCV2	t-SNARE coiled-coil homology domain-containing protein. (235 aa)
	A0A0E0ME70	PMR5N domain-containing protein. (363 aa)
	A0A0E0MFI6	Polysacc_synt_4 domain-containing protein. (161 aa)
	A0A0E0MFI7	Uncharacterized protein. (167 aa)
	A0A0E0MFJ4	Polysacc_synt_4 domain-containing protein. (296 aa)
	A0A0E0MJM9	Uncharacterized protein. (456 aa)
	A0A0E0MKQ1	DAHP_synth_1 domain-containing protein. (291 aa)
	A0A0E0MNF4	Uncharacterized protein. (495 aa)
	A0A0E0MNZ6	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (555 aa)
	A0A0E0JEA3	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (478 aa)
	A0A0E0JLG3	Uncharacterized protein. (523 aa)
	A0A0E0JMC6	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (446 aa)
	A0A0E0JQK2	PMR5N domain-containing protein. (522 aa)
	A0A0E0JRT0	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (636 aa)
	A0A0E0JT15	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (427 aa)
	A0A0E0JT16	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (906 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JEA3	A0A0E0K9S0	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.416
A0A0E0JMC6	A0A0E0LQ65	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.	0.491
A0A0E0JQK2	A0A0E0LQ65	PMR5N domain-containing protein.	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.	0.483
A0A0E0JRT0	A0A0E0LEW9	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Polysacc_synt_4 domain-containing protein.	0.402
A0A0E0JVT4	A0A0E0K0L0	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A0E0JVT4	A0A0E0KCM1	Uncharacterized protein.	Uncharacterized protein.	0.440
A0A0E0JVT4	A0A0E0KF26	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.499
A0A0E0JVT4	A0A0E0KJ62	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.500
A0A0E0JVT4	A0A0E0KTC3	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.484
A0A0E0JVT4	A0A0E0L209	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.502
A0A0E0JVT4	A0A0E0LN23	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.491
A0A0E0JVT4	A0A0E0LN24	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.515
A0A0E0JVT4	A0A0E0M995	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A0E0JVT4	A0A0E0MFI7	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A0E0JVT4	A0A0E0MJM9	Uncharacterized protein.	Uncharacterized protein.	0.409
A0A0E0JYE9	A0A0E0MJM9	Uncharacterized protein.	Uncharacterized protein.	0.411
A0A0E0K0L0	A0A0E0JVT4	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A0E0K0L0	A0A0E0KJ62	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.409
A0A0E0K0L0	A0A0E0KTC3	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.414
A0A0E0K0L0	A0A0E0KU72	Uncharacterized protein.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.401