19 items (Oryza punctata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0KGZ1	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (240 aa)
	A0A0E0JDV6	Uncharacterized protein; Belongs to the AAA ATPase family. (433 aa)
	A0A0E0JDV7	Uncharacterized protein; Belongs to the AAA ATPase family. (468 aa)
	A0A0E0JH48	LRRNT_2 domain-containing protein. (217 aa)
	A0A0E0JK59	V-SNARE domain-containing protein. (256 aa)
	A0A0E0JL22	Protein YIPF. (293 aa)
	A0A0E0JL67	Protein kinase domain-containing protein. (919 aa)
	A0A0E0JN15	V-SNARE domain-containing protein. (221 aa)
	A0A0E0JP17	Uncharacterized protein. (221 aa)
	A0A0E0JQ12	LRRNT_2 domain-containing protein. (221 aa)
	A0A0E0JQH9	PX domain-containing protein. (507 aa)
	A0A0E0JVU2	Uncharacterized protein; Belongs to the AAA ATPase family. (414 aa)
	A0A0E0KE55	t-SNARE coiled-coil homology domain-containing protein. (275 aa)
	A0A0E0L0Q3	WD_REPEATS_REGION domain-containing protein. (580 aa)
	A0A0E0L186	PX domain-containing protein. (541 aa)
	A0A0E0LMH8	FYVE-type domain-containing protein. (515 aa)
	A0A0E0LNV2	t-SNARE coiled-coil homology domain-containing protein. (266 aa)
	A0A0E0M929	DUF1308 domain-containing protein. (360 aa)
	A0A0E0MB45	J domain-containing protein. (2554 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JK59	A0A0E0JN15	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.938
A0A0E0JK59	A0A0E0KGZ1	V-SNARE domain-containing protein.	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.573
A0A0E0JN15	A0A0E0JK59	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.938
A0A0E0JN15	A0A0E0KGZ1	V-SNARE domain-containing protein.	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.573
A0A0E0JQH9	A0A0E0MB45	PX domain-containing protein.	J domain-containing protein.	0.615
A0A0E0KGZ1	A0A0E0JK59	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	V-SNARE domain-containing protein.	0.573
A0A0E0KGZ1	A0A0E0JN15	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	V-SNARE domain-containing protein.	0.573
A0A0E0L186	A0A0E0MB45	PX domain-containing protein.	J domain-containing protein.	0.669
A0A0E0MB45	A0A0E0JQH9	J domain-containing protein.	PX domain-containing protein.	0.615
A0A0E0MB45	A0A0E0L186	J domain-containing protein.	PX domain-containing protein.	0.669