(52 nodes) Galactose-binding-like domain superfamily network (Oryza punctata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0KA71	Uncharacterized protein. (822 aa)
	A0A0E0KBF6	Beta-galactosidase. (1005 aa)
	A0A0E0KHB7	GH10 domain-containing protein. (744 aa)
	A0A0E0KK55	PITH domain-containing protein. (190 aa)
	A0A0E0KNK6	Alpha-L-AF_C domain-containing protein. (664 aa)
	A0A0E0KS99	Uncharacterized protein. (377 aa)
	A0A0E0KSA0	DUF642 domain-containing protein. (202 aa)
	A0A0E0KSA1	Uncharacterized protein. (380 aa)
	A0A0E0KSA2	Uncharacterized protein. (371 aa)
	A0A0E0KSA4	Uncharacterized protein. (379 aa)
	A0A0E0KTU7	Uncharacterized protein. (516 aa)
	A0A0E0L0W1	GH10 domain-containing protein. (570 aa)
	A0A0E0L191	Uncharacterized protein. (737 aa)
	A0A0E0L238	Uncharacterized protein. (978 aa)
	A0A0E0L2U9	Beta-galactosidase. (936 aa)
	A0A0E0L536	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family. (682 aa)
	A0A0E0L537	C2 domain-containing protein. (745 aa)
	A0A0E0L669	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (201 aa)
	A0A0E0LCV5	Beta-galactosidase. (715 aa)
	A0A0E0M6L1	Beta-galactosidase. (829 aa)
	A0A0E0M6N6	Beta-galactosidase. (791 aa)
	A0A0E0M6T6	Uncharacterized protein. (1112 aa)
	A0A0E0MBA3	Uncharacterized protein. (2129 aa)
	A0A0E0MC27	Alpha-L-AF_C domain-containing protein. (659 aa)
	A0A0E0MC48	Uncharacterized protein. (655 aa)
	A0A0E0MJ82	Uncharacterized protein. (1169 aa)
	A0A0E0MJA4	Uncharacterized protein. (548 aa)
	A0A0E0MLX9	Beta-galactosidase. (913 aa)
	A0A0E0LXQ1	Beta-galactosidase. (841 aa)
	A0A0E0LXU4	Uncharacterized protein. (640 aa)
	A0A0E0M3J0	F5/8 type C domain-containing protein. (488 aa)
	A0A0E0M3Y1	Beta-galactosidase. (838 aa)
	A0A0E0LKX4	Rad4 domain-containing protein. (761 aa)
	A0A0E0LK57	GH10 domain-containing protein. (1101 aa)
	A0A0E0LFE2	Uncharacterized protein. (645 aa)
	A0A0E0JDR4	Uncharacterized protein. (1112 aa)
	A0A0E0JJS0	Beta-galactosidase. (824 aa)
	A0A0E0JK46	PITH domain-containing protein; Belongs to the peptidase M16 family. (1142 aa)
	A0A0E0JKF1	Beta-galactosidase. (779 aa)
	A0A0E0JKS6	SUN domain-containing protein. (483 aa)
	A0A0E0JL25	Uncharacterized protein. (373 aa)
	A0A0E0JNH6	CIA30 domain-containing protein. (229 aa)
	A0A0E0JNV6	Uncharacterized protein. (399 aa)
	A0A0E0JRP7	Uncharacterized protein. (741 aa)
	A0A0E0JRQ4	SUN domain-containing protein. (615 aa)
	A0A0E0JTP6	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family. (1117 aa)
	A0A0E0JVB4	Uncharacterized protein. (597 aa)
	A0A0E0JX46	Uncharacterized protein. (377 aa)
	A0A0E0JXD8	Beta-galactosidase. (726 aa)
	A0A0E0JXS9	Uncharacterized protein. (595 aa)
	A0A0E0K975	SUEL-type lectin domain-containing protein. (875 aa)
	A0A0E0KA67	GH10 domain-containing protein. (562 aa)

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JJS0	A0A0E0JTP6	Beta-galactosidase.	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	0.569
A0A0E0JJS0	A0A0E0L238	Beta-galactosidase.	Uncharacterized protein.	0.465
A0A0E0JKF1	A0A0E0JTP6	Beta-galactosidase.	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	0.881
A0A0E0JKF1	A0A0E0L238	Beta-galactosidase.	Uncharacterized protein.	0.465
A0A0E0JKF1	A0A0E0L536	Beta-galactosidase.	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	0.750
A0A0E0JKF1	A0A0E0L537	Beta-galactosidase.	C2 domain-containing protein.	0.751
A0A0E0JNH6	A0A0E0JVB4	CIA30 domain-containing protein.	Uncharacterized protein.	0.664
A0A0E0JNH6	A0A0E0JXS9	CIA30 domain-containing protein.	Uncharacterized protein.	0.664
A0A0E0JNH6	A0A0E0LFE2	CIA30 domain-containing protein.	Uncharacterized protein.	0.664
A0A0E0JRP7	A0A0E0JTP6	Uncharacterized protein.	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	0.569
A0A0E0JRP7	A0A0E0L238	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A0E0JTP6	A0A0E0JJS0	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Beta-galactosidase.	0.569
A0A0E0JTP6	A0A0E0JKF1	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Beta-galactosidase.	0.881
A0A0E0JTP6	A0A0E0JRP7	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Uncharacterized protein.	0.569
A0A0E0JTP6	A0A0E0JXD8	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Beta-galactosidase.	0.881
A0A0E0JTP6	A0A0E0K975	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	SUEL-type lectin domain-containing protein.	0.569
A0A0E0JTP6	A0A0E0KBF6	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Beta-galactosidase.	0.887
A0A0E0JTP6	A0A0E0KNK6	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Alpha-L-AF_C domain-containing protein.	0.505
A0A0E0JTP6	A0A0E0KTU7	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Uncharacterized protein.	0.416
A0A0E0JTP6	A0A0E0L191	Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.	Uncharacterized protein.	0.635