6 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NMW6_ORYGL	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
	I1P3M7_ORYGL	Uncharacterized protein. (123 aa)
	I1P567_ORYGL	Uncharacterized protein. (51 aa)
	I1PUR6_ORYGL	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
	I1PXT9_ORYGL	Uncharacterized protein. (111 aa)
	I1PXU0_ORYGL	Uncharacterized protein. (92 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NMW6_ORYGL	I1P3M7_ORYGL	I1NMW6	I1P3M7	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.996
I1NMW6_ORYGL	I1P567_ORYGL	I1NMW6	I1P567	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.999
I1NMW6_ORYGL	I1PUR6_ORYGL	I1NMW6	I1PUR6	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.998
I1NMW6_ORYGL	I1PXT9_ORYGL	I1NMW6	I1PXT9	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.999
I1NMW6_ORYGL	I1PXU0_ORYGL	I1NMW6	I1PXU0	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.997
I1P3M7_ORYGL	I1NMW6_ORYGL	I1P3M7	I1NMW6	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.996
I1P3M7_ORYGL	I1P567_ORYGL	I1P3M7	I1P567	Uncharacterized protein.	Uncharacterized protein.	0.999
I1P3M7_ORYGL	I1PUR6_ORYGL	I1P3M7	I1PUR6	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
I1P3M7_ORYGL	I1PXT9_ORYGL	I1P3M7	I1PXT9	Uncharacterized protein.	Uncharacterized protein.	0.999
I1P3M7_ORYGL	I1PXU0_ORYGL	I1P3M7	I1PXU0	Uncharacterized protein.	Uncharacterized protein.	0.997
I1P567_ORYGL	I1NMW6_ORYGL	I1P567	I1NMW6	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
I1P567_ORYGL	I1P3M7_ORYGL	I1P567	I1P3M7	Uncharacterized protein.	Uncharacterized protein.	0.999
I1P567_ORYGL	I1PUR6_ORYGL	I1P567	I1PUR6	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
I1P567_ORYGL	I1PXT9_ORYGL	I1P567	I1PXT9	Uncharacterized protein.	Uncharacterized protein.	0.999
I1P567_ORYGL	I1PXU0_ORYGL	I1P567	I1PXU0	Uncharacterized protein.	Uncharacterized protein.	0.999
I1PUR6_ORYGL	I1NMW6_ORYGL	I1PUR6	I1NMW6	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.998
I1PUR6_ORYGL	I1P3M7_ORYGL	I1PUR6	I1P3M7	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999
I1PUR6_ORYGL	I1P567_ORYGL	I1PUR6	I1P567	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999
I1PUR6_ORYGL	I1PXT9_ORYGL	I1PUR6	I1PXT9	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999
I1PUR6_ORYGL	I1PXU0_ORYGL	I1PUR6	I1PXU0	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999