(42 nodes) Prenyltransferase activity, and Cholesterol biosynthesis network (Oryza glaberrima)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NLV7_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (376 aa)
	I1NM46_ORYGL	FAD_binding_3 domain-containing protein. (457 aa)
	I1NQX7_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (356 aa)
	I1NR13_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (353 aa)
	I1NRW6_ORYGL	AA_kinase domain-containing protein. (335 aa)
	I1NTH2_ORYGL	Alkyl transferase; Belongs to the UPP synthase family. (295 aa)
	I1NVL4_ORYGL	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (466 aa)
	I1NWE9_ORYGL	MDD_C domain-containing protein. (674 aa)
	I1NWG1_ORYGL	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (354 aa)
	I1NX58_ORYGL	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (763 aa)
	I1NY91_ORYGL	Uncharacterized protein. (240 aa)
	I1P1H8_ORYGL	Uncharacterized protein; Belongs to the terpene synthase family. (800 aa)
	I1P2Z1_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (342 aa)
	I1P3K1_ORYGL	3-hydroxy-3-methylglutaryl coenzyme A reductase. (543 aa)
	I1P479_ORYGL	FAD_binding_3 domain-containing protein. (463 aa)
	I1P8I7_ORYGL	Uncharacterized protein. (289 aa)
	I1P9J8_ORYGL	Uncharacterized protein. (512 aa)
	I1PH84_ORYGL	Amino_oxidase domain-containing protein. (562 aa)
	I1PJ34_ORYGL	Terpene_synth domain-containing protein. (767 aa)
	I1PQG0_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (392 aa)
	I1PQG1_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (407 aa)
	I1PTK9_ORYGL	Uncharacterized protein. (88 aa)
	I1PVM2_ORYGL	Nudix hydrolase domain-containing protein. (293 aa)
	I1PXK5_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (355 aa)
	I1PYB4_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (403 aa)
	I1PZV6_ORYGL	Alkyl transferase; Belongs to the UPP synthase family. (336 aa)
	I1Q4A2_ORYGL	Uncharacterized protein. (569 aa)
	I1Q6W3_ORYGL	Uncharacterized protein. (420 aa)
	I1Q6W8_ORYGL	Uncharacterized protein; Belongs to the IPP transferase family. (417 aa)
	I1QBD6_ORYGL	Nudix hydrolase domain-containing protein. (238 aa)
	I1QC23_ORYGL	Alkyl transferase; Belongs to the UPP synthase family. (335 aa)
	I1QEJ6_ORYGL	Uncharacterized protein. (379 aa)
	I1QEM9_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (366 aa)
	I1QG23_ORYGL	Mevalonate kinase. (390 aa)
	I1QGB7_ORYGL	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (399 aa)
	I1QK40_ORYGL	3-hydroxy-3-methylglutaryl coenzyme A reductase. (561 aa)
	I1QMV1_ORYGL	Uncharacterized protein. (283 aa)
	I1QQ20_ORYGL	Uncharacterized protein. (514 aa)
	I1QR57_ORYGL	Uncharacterized protein. (335 aa)
	I1QTG2_ORYGL	Mevalonate kinase. (401 aa)
	I1QZD1_ORYGL	Uncharacterized protein. (75 aa)
	I1R8D3_ORYGL	Uncharacterized protein. (259 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NLV7_ORYGL	I1NM46_ORYGL	I1NLV7	I1NM46	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	FAD_binding_3 domain-containing protein.	0.919
I1NLV7_ORYGL	I1NQX7_ORYGL	I1NLV7	I1NQX7	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.886
I1NLV7_ORYGL	I1NR13_ORYGL	I1NLV7	I1NR13	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.887
I1NLV7_ORYGL	I1NRW6_ORYGL	I1NLV7	I1NRW6	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	AA_kinase domain-containing protein.	0.874
I1NLV7_ORYGL	I1NTH2_ORYGL	I1NLV7	I1NTH2	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Alkyl transferase; Belongs to the UPP synthase family.	0.895
I1NLV7_ORYGL	I1NVL4_ORYGL	I1NLV7	I1NVL4	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.890
I1NLV7_ORYGL	I1NWE9_ORYGL	I1NLV7	I1NWE9	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	MDD_C domain-containing protein.	0.930
I1NLV7_ORYGL	I1NWG1_ORYGL	I1NLV7	I1NWG1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.	0.930
I1NLV7_ORYGL	I1NX58_ORYGL	I1NLV7	I1NX58	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.684
I1NLV7_ORYGL	I1NY91_ORYGL	I1NLV7	I1NY91	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.877
I1NLV7_ORYGL	I1P1H8_ORYGL	I1NLV7	I1P1H8	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the terpene synthase family.	0.884
I1NLV7_ORYGL	I1P2Z1_ORYGL	I1NLV7	I1P2Z1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.975
I1NLV7_ORYGL	I1P3K1_ORYGL	I1NLV7	I1P3K1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.404
I1NLV7_ORYGL	I1P479_ORYGL	I1NLV7	I1P479	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	FAD_binding_3 domain-containing protein.	0.920
I1NLV7_ORYGL	I1P8I7_ORYGL	I1NLV7	I1P8I7	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.877
I1NLV7_ORYGL	I1PH84_ORYGL	I1NLV7	I1PH84	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Amino_oxidase domain-containing protein.	0.550
I1NLV7_ORYGL	I1PJ34_ORYGL	I1NLV7	I1PJ34	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Terpene_synth domain-containing protein.	0.884
I1NLV7_ORYGL	I1PQG0_ORYGL	I1NLV7	I1PQG0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.886
I1NLV7_ORYGL	I1PQG1_ORYGL	I1NLV7	I1PQG1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.886
I1NLV7_ORYGL	I1PTK9_ORYGL	I1NLV7	I1PTK9	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.851