47 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NM86_ORYGL	Uncharacterized protein. (515 aa)
	I1NNR5_ORYGL	Uncharacterized protein. (529 aa)
	I1NP61_ORYGL	Uncharacterized protein. (301 aa)
	I1NQG4_ORYGL	Uncharacterized protein. (388 aa)
	I1NQU6_ORYGL	AAI domain-containing protein. (103 aa)
	I1NRR2_ORYGL	Uncharacterized protein. (399 aa)
	I1NS47_ORYGL	Uncharacterized protein. (307 aa)
	I1NZE0_ORYGL	Uncharacterized protein. (80 aa)
	I1P2V5_ORYGL	AAI domain-containing protein. (128 aa)
	I1P5Y1_ORYGL	Uncharacterized protein. (86 aa)
	I1P817_ORYGL	BHLH domain-containing protein. (91 aa)
	I1PC81_ORYGL	Uncharacterized protein. (163 aa)
	I1PFN0_ORYGL	Uncharacterized protein. (68 aa)
	I1PGG2_ORYGL	AAI domain-containing protein. (164 aa)
	I1PMD5_ORYGL	Uncharacterized protein. (235 aa)
	I1PML7_ORYGL	Uncharacterized protein. (372 aa)
	I1PNC8_ORYGL	HMA domain-containing protein. (78 aa)
	I1PPT9_ORYGL	AAI domain-containing protein. (159 aa)
	I1PQZ6_ORYGL	Uncharacterized protein. (154 aa)
	I1PR33_ORYGL	Uncharacterized protein. (81 aa)
	I1PTX5_ORYGL	Uncharacterized protein. (242 aa)
	I1PVV3_ORYGL	Uncharacterized protein. (130 aa)
	I1PWC9_ORYGL	C2H2-type domain-containing protein. (292 aa)
	I1PWL9_ORYGL	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues. (129 aa)
	I1PXP2_ORYGL	AAI domain-containing protein. (94 aa)
	I1PXP3_ORYGL	AAI domain-containing protein. (96 aa)
	I1Q963_ORYGL	Uncharacterized protein. (835 aa)
	I1QHE8_ORYGL	C2H2-type domain-containing protein. (231 aa)
	I1QM97_ORYGL	Uncharacterized protein. (399 aa)
	I1QT95_ORYGL	ANK_REP_REGION domain-containing protein. (148 aa)
	I1QT97_ORYGL	Uncharacterized protein. (188 aa)
	I1QTN2_ORYGL	AAI domain-containing protein. (137 aa)
	I1QTN3_ORYGL	AAI domain-containing protein. (133 aa)
	I1QTN6_ORYGL	AAI domain-containing protein. (126 aa)
	I1QUB5_ORYGL	BHLH domain-containing protein. (91 aa)
	I1QVS1_ORYGL	AAI domain-containing protein. (149 aa)
	I1QVS5_ORYGL	AAI domain-containing protein. (131 aa)
	I1QVS6_ORYGL	AAI domain-containing protein. (136 aa)
	I1QYC9_ORYGL	Uncharacterized protein. (110 aa)
	I1QZU5_ORYGL	Uncharacterized protein. (91 aa)
	I1R0S6_ORYGL	Uncharacterized protein. (461 aa)
	I1R159_ORYGL	Uncharacterized protein. (148 aa)
	I1R3F7_ORYGL	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues. (119 aa)
	I1R5R5_ORYGL	Uncharacterized protein. (201 aa)
	I1R6R6_ORYGL	Uncharacterized protein. (209 aa)
	I1R7R0_ORYGL	Gnk2-homologous domain-containing protein. (198 aa)
	I1R7R2_ORYGL	Uncharacterized protein. (66 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NM86_ORYGL	I1NNR5_ORYGL	I1NM86	I1NNR5	Uncharacterized protein.	Uncharacterized protein.	0.535
I1NM86_ORYGL	I1NP61_ORYGL	I1NM86	I1NP61	Uncharacterized protein.	Uncharacterized protein.	0.508
I1NM86_ORYGL	I1NQG4_ORYGL	I1NM86	I1NQG4	Uncharacterized protein.	Uncharacterized protein.	0.506
I1NM86_ORYGL	I1NQU6_ORYGL	I1NM86	I1NQU6	Uncharacterized protein.	AAI domain-containing protein.	0.541
I1NM86_ORYGL	I1NRR2_ORYGL	I1NM86	I1NRR2	Uncharacterized protein.	Uncharacterized protein.	0.534
I1NM86_ORYGL	I1NS47_ORYGL	I1NM86	I1NS47	Uncharacterized protein.	Uncharacterized protein.	0.508
I1NM86_ORYGL	I1NZE0_ORYGL	I1NM86	I1NZE0	Uncharacterized protein.	Uncharacterized protein.	0.487
I1NM86_ORYGL	I1P2V5_ORYGL	I1NM86	I1P2V5	Uncharacterized protein.	AAI domain-containing protein.	0.611
I1NM86_ORYGL	I1P5Y1_ORYGL	I1NM86	I1P5Y1	Uncharacterized protein.	Uncharacterized protein.	0.535
I1NM86_ORYGL	I1P817_ORYGL	I1NM86	I1P817	Uncharacterized protein.	BHLH domain-containing protein.	0.529
I1NM86_ORYGL	I1PC81_ORYGL	I1NM86	I1PC81	Uncharacterized protein.	Uncharacterized protein.	0.539
I1NM86_ORYGL	I1PFN0_ORYGL	I1NM86	I1PFN0	Uncharacterized protein.	Uncharacterized protein.	0.604
I1NM86_ORYGL	I1PGG2_ORYGL	I1NM86	I1PGG2	Uncharacterized protein.	AAI domain-containing protein.	0.599
I1NM86_ORYGL	I1PMD5_ORYGL	I1NM86	I1PMD5	Uncharacterized protein.	Uncharacterized protein.	0.519
I1NM86_ORYGL	I1PML7_ORYGL	I1NM86	I1PML7	Uncharacterized protein.	Uncharacterized protein.	0.529
I1NM86_ORYGL	I1PNC8_ORYGL	I1NM86	I1PNC8	Uncharacterized protein.	HMA domain-containing protein.	0.413
I1NM86_ORYGL	I1PPT9_ORYGL	I1NM86	I1PPT9	Uncharacterized protein.	AAI domain-containing protein.	0.620
I1NM86_ORYGL	I1PQZ6_ORYGL	I1NM86	I1PQZ6	Uncharacterized protein.	Uncharacterized protein.	0.529
I1NM86_ORYGL	I1PR33_ORYGL	I1NM86	I1PR33	Uncharacterized protein.	Uncharacterized protein.	0.525
I1NM86_ORYGL	I1PTX5_ORYGL	I1NM86	I1PTX5	Uncharacterized protein.	Uncharacterized protein.	0.605