10 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NPK5_ORYGL	Uncharacterized protein. (373 aa)
	I1NYG9_ORYGL	Uncharacterized protein. (173 aa)
	I1P815_ORYGL	BHLH domain-containing protein. (92 aa)
	I1PMU2_ORYGL	Uncharacterized protein. (559 aa)
	I1PPF0_ORYGL	Uncharacterized protein. (224 aa)
	I1Q2D1_ORYGL	GUB_WAK_bind domain-containing protein. (327 aa)
	I1Q8Z0_ORYGL	Uncharacterized protein. (403 aa)
	I1QC22_ORYGL	Uncharacterized protein. (164 aa)
	I1QZ35_ORYGL	Uncharacterized protein. (104 aa)
	I1R2L6_ORYGL	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues. (118 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NPK5_ORYGL	I1NYG9_ORYGL	I1NPK5	I1NYG9	Uncharacterized protein.	Uncharacterized protein.	0.507
I1NPK5_ORYGL	I1P815_ORYGL	I1NPK5	I1P815	Uncharacterized protein.	BHLH domain-containing protein.	0.526
I1NPK5_ORYGL	I1PMU2_ORYGL	I1NPK5	I1PMU2	Uncharacterized protein.	Uncharacterized protein.	0.517
I1NPK5_ORYGL	I1PPF0_ORYGL	I1NPK5	I1PPF0	Uncharacterized protein.	Uncharacterized protein.	0.534
I1NPK5_ORYGL	I1Q2D1_ORYGL	I1NPK5	I1Q2D1	Uncharacterized protein.	GUB_WAK_bind domain-containing protein.	0.540
I1NPK5_ORYGL	I1QC22_ORYGL	I1NPK5	I1QC22	Uncharacterized protein.	Uncharacterized protein.	0.525
I1NPK5_ORYGL	I1QZ35_ORYGL	I1NPK5	I1QZ35	Uncharacterized protein.	Uncharacterized protein.	0.473
I1NPK5_ORYGL	I1R2L6_ORYGL	I1NPK5	I1R2L6	Uncharacterized protein.	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	0.482
I1NYG9_ORYGL	I1NPK5_ORYGL	I1NYG9	I1NPK5	Uncharacterized protein.	Uncharacterized protein.	0.507
I1NYG9_ORYGL	I1P815_ORYGL	I1NYG9	I1P815	Uncharacterized protein.	BHLH domain-containing protein.	0.516
I1NYG9_ORYGL	I1PMU2_ORYGL	I1NYG9	I1PMU2	Uncharacterized protein.	Uncharacterized protein.	0.532
I1NYG9_ORYGL	I1PPF0_ORYGL	I1NYG9	I1PPF0	Uncharacterized protein.	Uncharacterized protein.	0.486
I1NYG9_ORYGL	I1Q2D1_ORYGL	I1NYG9	I1Q2D1	Uncharacterized protein.	GUB_WAK_bind domain-containing protein.	0.508
I1NYG9_ORYGL	I1Q8Z0_ORYGL	I1NYG9	I1Q8Z0	Uncharacterized protein.	Uncharacterized protein.	0.512
I1NYG9_ORYGL	I1QC22_ORYGL	I1NYG9	I1QC22	Uncharacterized protein.	Uncharacterized protein.	0.541
I1NYG9_ORYGL	I1QZ35_ORYGL	I1NYG9	I1QZ35	Uncharacterized protein.	Uncharacterized protein.	0.513
I1NYG9_ORYGL	I1R2L6_ORYGL	I1NYG9	I1R2L6	Uncharacterized protein.	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	0.481
I1P815_ORYGL	I1NPK5_ORYGL	I1P815	I1NPK5	BHLH domain-containing protein.	Uncharacterized protein.	0.526
I1P815_ORYGL	I1NYG9_ORYGL	I1P815	I1NYG9	BHLH domain-containing protein.	Uncharacterized protein.	0.516
I1P815_ORYGL	I1PMU2_ORYGL	I1P815	I1PMU2	BHLH domain-containing protein.	Uncharacterized protein.	0.488