6 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NKG2_ORYGL	Uncharacterized protein. (329 aa)
	I1NXE0_ORYGL	LRRNT_2 domain-containing protein. (665 aa)
	I1P8U1_ORYGL	Uncharacterized protein. (263 aa)
	I1PRN6_ORYGL	LRRNT_2 domain-containing protein. (401 aa)
	I1Q8H5_ORYGL	Uncharacterized protein. (375 aa)
	I1QY38_ORYGL	LRRNT_2 domain-containing protein. (878 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NKG2_ORYGL	I1P8U1_ORYGL	I1NKG2	I1P8U1	Uncharacterized protein.	Uncharacterized protein.	0.494
I1NKG2_ORYGL	I1PRN6_ORYGL	I1NKG2	I1PRN6	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.609
I1NKG2_ORYGL	I1QY38_ORYGL	I1NKG2	I1QY38	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.534
I1NXE0_ORYGL	I1P8U1_ORYGL	I1NXE0	I1P8U1	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.524
I1P8U1_ORYGL	I1NKG2_ORYGL	I1P8U1	I1NKG2	Uncharacterized protein.	Uncharacterized protein.	0.494
I1P8U1_ORYGL	I1NXE0_ORYGL	I1P8U1	I1NXE0	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.524
I1P8U1_ORYGL	I1PRN6_ORYGL	I1P8U1	I1PRN6	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.533
I1P8U1_ORYGL	I1Q8H5_ORYGL	I1P8U1	I1Q8H5	Uncharacterized protein.	Uncharacterized protein.	0.601
I1PRN6_ORYGL	I1NKG2_ORYGL	I1PRN6	I1NKG2	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.609
I1PRN6_ORYGL	I1P8U1_ORYGL	I1PRN6	I1P8U1	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.533
I1Q8H5_ORYGL	I1P8U1_ORYGL	I1Q8H5	I1P8U1	Uncharacterized protein.	Uncharacterized protein.	0.601
I1QY38_ORYGL	I1NKG2_ORYGL	I1QY38	I1NKG2	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.534