(31 nodes) Mostly uncharacterized, incl. Protein LITTLE ZIPPER, and Dehydrin network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NL57_ORYGL	Uncharacterized protein. (237 aa)
	I1NP96_ORYGL	Uncharacterized protein. (204 aa)
	I1P057_ORYGL	Uncharacterized protein. (423 aa)
	I1P0H7_ORYGL	Uncharacterized protein. (111 aa)
	I1P0Y2_ORYGL	Uncharacterized protein. (87 aa)
	I1P1U7_ORYGL	Rx_N domain-containing protein. (120 aa)
	I1P3M1_ORYGL	Uncharacterized protein. (142 aa)
	I1P4R5_ORYGL	Uncharacterized protein. (101 aa)
	I1P5E1_ORYGL	Uncharacterized protein. (1030 aa)
	I1P844_ORYGL	Uncharacterized protein. (106 aa)
	I1PBP9_ORYGL	Uncharacterized protein. (565 aa)
	I1PL12_ORYGL	Uncharacterized protein. (99 aa)
	I1PL44_ORYGL	AAI domain-containing protein. (123 aa)
	I1PM12_ORYGL	Uncharacterized protein. (109 aa)
	I1PRZ7_ORYGL	Uncharacterized protein. (223 aa)
	I1PSU2_ORYGL	Uncharacterized protein. (183 aa)
	I1PYH6_ORYGL	Uncharacterized protein. (101 aa)
	I1Q2F3_ORYGL	Uncharacterized protein. (428 aa)
	I1Q2F4_ORYGL	Uncharacterized protein. (183 aa)
	I1Q726_ORYGL	Uncharacterized protein. (103 aa)
	I1QDH4_ORYGL	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (201 aa)
	I1QGZ8_ORYGL	Rx_N domain-containing protein. (109 aa)
	I1QNE7_ORYGL	Uncharacterized protein. (375 aa)
	I1QQ13_ORYGL	Uncharacterized protein. (180 aa)
	I1QV85_ORYGL	Uncharacterized protein. (119 aa)
	I1QZY5_ORYGL	Uncharacterized protein; Belongs to the plant dehydrin family. (151 aa)
	I1QZY7_ORYGL	Uncharacterized protein; Belongs to the plant dehydrin family. (164 aa)
	I1R440_ORYGL	Uncharacterized protein. (81 aa)
	I1R5J7_ORYGL	Inhibitor_I29 domain-containing protein. (101 aa)
	I1R697_ORYGL	Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (269 aa)
	I1R931_ORYGL	Uncharacterized protein. (97 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NL57_ORYGL	I1NP96_ORYGL	I1NL57	I1NP96	Uncharacterized protein.	Uncharacterized protein.	0.509
I1NL57_ORYGL	I1P057_ORYGL	I1NL57	I1P057	Uncharacterized protein.	Uncharacterized protein.	0.503
I1NL57_ORYGL	I1P0H7_ORYGL	I1NL57	I1P0H7	Uncharacterized protein.	Uncharacterized protein.	0.481
I1NL57_ORYGL	I1P0Y2_ORYGL	I1NL57	I1P0Y2	Uncharacterized protein.	Uncharacterized protein.	0.477
I1NL57_ORYGL	I1P1U7_ORYGL	I1NL57	I1P1U7	Uncharacterized protein.	Rx_N domain-containing protein.	0.457
I1NL57_ORYGL	I1P3M1_ORYGL	I1NL57	I1P3M1	Uncharacterized protein.	Uncharacterized protein.	0.500
I1NL57_ORYGL	I1P4R5_ORYGL	I1NL57	I1P4R5	Uncharacterized protein.	Uncharacterized protein.	0.485
I1NL57_ORYGL	I1P844_ORYGL	I1NL57	I1P844	Uncharacterized protein.	Uncharacterized protein.	0.526
I1NL57_ORYGL	I1PBP9_ORYGL	I1NL57	I1PBP9	Uncharacterized protein.	Uncharacterized protein.	0.519
I1NL57_ORYGL	I1PL12_ORYGL	I1NL57	I1PL12	Uncharacterized protein.	Uncharacterized protein.	0.481
I1NL57_ORYGL	I1PM12_ORYGL	I1NL57	I1PM12	Uncharacterized protein.	Uncharacterized protein.	0.480
I1NL57_ORYGL	I1PRZ7_ORYGL	I1NL57	I1PRZ7	Uncharacterized protein.	Uncharacterized protein.	0.520
I1NL57_ORYGL	I1PSU2_ORYGL	I1NL57	I1PSU2	Uncharacterized protein.	Uncharacterized protein.	0.517
I1NL57_ORYGL	I1PYH6_ORYGL	I1NL57	I1PYH6	Uncharacterized protein.	Uncharacterized protein.	0.520
I1NL57_ORYGL	I1Q2F3_ORYGL	I1NL57	I1Q2F3	Uncharacterized protein.	Uncharacterized protein.	0.520
I1NL57_ORYGL	I1Q2F4_ORYGL	I1NL57	I1Q2F4	Uncharacterized protein.	Uncharacterized protein.	0.406
I1NL57_ORYGL	I1Q726_ORYGL	I1NL57	I1Q726	Uncharacterized protein.	Uncharacterized protein.	0.504
I1NL57_ORYGL	I1QDH4_ORYGL	I1NL57	I1QDH4	Uncharacterized protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.492
I1NL57_ORYGL	I1QV85_ORYGL	I1NL57	I1QV85	Uncharacterized protein.	Uncharacterized protein.	0.464
I1NL57_ORYGL	I1QZY5_ORYGL	I1NL57	I1QZY5	Uncharacterized protein.	Uncharacterized protein; Belongs to the plant dehydrin family.	0.460