48 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NM99_ORYGL	Uncharacterized protein. (605 aa)
	I1NP82_ORYGL	LOB domain-containing protein. (175 aa)
	I1NP84_ORYGL	LOB domain-containing protein. (128 aa)
	I1NT72_ORYGL	Uncharacterized protein. (334 aa)
	I1NTD8_ORYGL	Uncharacterized protein. (574 aa)
	I1NUX5_ORYGL	LOB domain-containing protein. (117 aa)
	I1NX42_ORYGL	Uncharacterized protein. (102 aa)
	I1NXT7_ORYGL	Uncharacterized protein. (634 aa)
	I1NY71_ORYGL	DOG1 domain-containing protein. (153 aa)
	I1P1D0_ORYGL	Uncharacterized protein. (653 aa)
	I1P3J6_ORYGL	LOB domain-containing protein. (125 aa)
	I1P4K1_ORYGL	Uncharacterized protein. (93 aa)
	I1P7L3_ORYGL	LOB domain-containing protein. (259 aa)
	I1P7X3_ORYGL	TPR_REGION domain-containing protein. (315 aa)
	I1P7Z8_ORYGL	Uncharacterized protein. (466 aa)
	I1P9K7_ORYGL	Uncharacterized protein. (1133 aa)
	I1PD34_ORYGL	Uncharacterized protein. (271 aa)
	I1PFV7_ORYGL	Uncharacterized protein. (455 aa)
	I1PG84_ORYGL	LOB domain-containing protein. (74 aa)
	I1PGJ6_ORYGL	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1081 aa)
	I1PH56_ORYGL	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1092 aa)
	I1PIC4_ORYGL	Uncharacterized protein. (122 aa)
	I1PNV6_ORYGL	Uncharacterized protein. (570 aa)
	I1PRS8_ORYGL	Uncharacterized protein. (134 aa)
	I1PSV4_ORYGL	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1076 aa)
	I1PSX6_ORYGL	Uncharacterized protein. (123 aa)
	I1PTI1_ORYGL	PAP_fibrillin domain-containing protein. (69 aa)
	I1PW83_ORYGL	PRONE domain-containing protein. (569 aa)
	I1PX27_ORYGL	TPR_REGION domain-containing protein. (299 aa)
	I1PY95_ORYGL	SANT domain-containing protein. (90 aa)
	I1PYW3_ORYGL	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (263 aa)
	I1Q139_ORYGL	Uncharacterized protein. (222 aa)
	I1Q1E6_ORYGL	Uncharacterized protein. (385 aa)
	I1Q3U8_ORYGL	BZIP domain-containing protein. (172 aa)
	I1Q5C0_ORYGL	START domain-containing protein. (86 aa)
	I1Q6V0_ORYGL	Uncharacterized protein. (512 aa)
	I1Q7X7_ORYGL	Uncharacterized protein. (97 aa)
	I1Q902_ORYGL	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1081 aa)
	I1Q9H4_ORYGL	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1092 aa)
	I1QA83_ORYGL	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (1093 aa)
	I1QGX5_ORYGL	Cyclic nucleotide-binding domain-containing protein. (222 aa)
	I1QRV0_ORYGL	DOG1 domain-containing protein. (133 aa)
	I1QW22_ORYGL	DOG1 domain-containing protein. (141 aa)
	I1QX16_ORYGL	LOB domain-containing protein. (158 aa)
	I1R244_ORYGL	Uncharacterized protein. (93 aa)
	I1R3A9_ORYGL	LOB domain-containing protein. (156 aa)
	I1R3L4_ORYGL	ZF-HD dimerization-type domain-containing protein. (106 aa)
	I1R5A3_ORYGL	Uncharacterized protein. (310 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NM99_ORYGL	I1NP82_ORYGL	I1NM99	I1NP82	Uncharacterized protein.	LOB domain-containing protein.	0.531
I1NM99_ORYGL	I1NP84_ORYGL	I1NM99	I1NP84	Uncharacterized protein.	LOB domain-containing protein.	0.507
I1NM99_ORYGL	I1NT72_ORYGL	I1NM99	I1NT72	Uncharacterized protein.	Uncharacterized protein.	0.472
I1NM99_ORYGL	I1NTD8_ORYGL	I1NM99	I1NTD8	Uncharacterized protein.	Uncharacterized protein.	0.511
I1NM99_ORYGL	I1NUX5_ORYGL	I1NM99	I1NUX5	Uncharacterized protein.	LOB domain-containing protein.	0.526
I1NM99_ORYGL	I1NX42_ORYGL	I1NM99	I1NX42	Uncharacterized protein.	Uncharacterized protein.	0.524
I1NM99_ORYGL	I1NXT7_ORYGL	I1NM99	I1NXT7	Uncharacterized protein.	Uncharacterized protein.	0.522
I1NM99_ORYGL	I1NY71_ORYGL	I1NM99	I1NY71	Uncharacterized protein.	DOG1 domain-containing protein.	0.524
I1NM99_ORYGL	I1P1D0_ORYGL	I1NM99	I1P1D0	Uncharacterized protein.	Uncharacterized protein.	0.532
I1NM99_ORYGL	I1P3J6_ORYGL	I1NM99	I1P3J6	Uncharacterized protein.	LOB domain-containing protein.	0.513
I1NM99_ORYGL	I1P4K1_ORYGL	I1NM99	I1P4K1	Uncharacterized protein.	Uncharacterized protein.	0.516
I1NM99_ORYGL	I1P7L3_ORYGL	I1NM99	I1P7L3	Uncharacterized protein.	LOB domain-containing protein.	0.505
I1NM99_ORYGL	I1P7X3_ORYGL	I1NM99	I1P7X3	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.517
I1NM99_ORYGL	I1P7Z8_ORYGL	I1NM99	I1P7Z8	Uncharacterized protein.	Uncharacterized protein.	0.517
I1NM99_ORYGL	I1P9K7_ORYGL	I1NM99	I1P9K7	Uncharacterized protein.	Uncharacterized protein.	0.445
I1NM99_ORYGL	I1PD34_ORYGL	I1NM99	I1PD34	Uncharacterized protein.	Uncharacterized protein.	0.479
I1NM99_ORYGL	I1PG84_ORYGL	I1NM99	I1PG84	Uncharacterized protein.	LOB domain-containing protein.	0.526
I1NM99_ORYGL	I1PGJ6_ORYGL	I1NM99	I1PGJ6	Uncharacterized protein.	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.	0.488
I1NM99_ORYGL	I1PH56_ORYGL	I1NM99	I1PH56	Uncharacterized protein.	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.	0.460
I1NM99_ORYGL	I1PIC4_ORYGL	I1NM99	I1PIC4	Uncharacterized protein.	Uncharacterized protein.	0.513