(12 nodes) Mixed, incl. Histone H3-K27 methylation, and Associated with SET domains network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NVI9_ORYGL	Uncharacterized protein. (384 aa)
	I1P1J0_ORYGL	Uncharacterized protein. (503 aa)
	I1P7M7_ORYGL	Uncharacterized protein. (1363 aa)
	I1PDT2_ORYGL	WD_REPEATS_REGION domain-containing protein. (428 aa)
	I1PIY3_ORYGL	VEFS-Box domain-containing protein. (625 aa)
	I1PLB3_ORYGL	Uncharacterized protein. (528 aa)
	I1Q1I1_ORYGL	Histone-lysine N-methyltransferase. (896 aa)
	I1Q710_ORYGL	Histone-lysine N-methyltransferase. (678 aa)
	I1QFG9_ORYGL	WD_REPEATS_REGION domain-containing protein. (425 aa)
	I1QFH1_ORYGL	WD_REPEATS_REGION domain-containing protein. (466 aa)
	I1QHS7_ORYGL	Uncharacterized protein. (481 aa)
	I1R3B5_ORYGL	Uncharacterized protein. (250 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NVI9_ORYGL	I1P1J0_ORYGL	I1NVI9	I1P1J0	Uncharacterized protein.	Uncharacterized protein.	0.734
I1NVI9_ORYGL	I1P7M7_ORYGL	I1NVI9	I1P7M7	Uncharacterized protein.	Uncharacterized protein.	0.822
I1NVI9_ORYGL	I1PDT2_ORYGL	I1NVI9	I1PDT2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.448
I1NVI9_ORYGL	I1PIY3_ORYGL	I1NVI9	I1PIY3	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.813
I1NVI9_ORYGL	I1PLB3_ORYGL	I1NVI9	I1PLB3	Uncharacterized protein.	Uncharacterized protein.	0.808
I1NVI9_ORYGL	I1Q1I1_ORYGL	I1NVI9	I1Q1I1	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.660
I1NVI9_ORYGL	I1Q710_ORYGL	I1NVI9	I1Q710	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.660
I1NVI9_ORYGL	I1QFG9_ORYGL	I1NVI9	I1QFG9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.687
I1NVI9_ORYGL	I1QFH1_ORYGL	I1NVI9	I1QFH1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.687
I1NVI9_ORYGL	I1QHS7_ORYGL	I1NVI9	I1QHS7	Uncharacterized protein.	Uncharacterized protein.	0.648
I1NVI9_ORYGL	I1R3B5_ORYGL	I1NVI9	I1R3B5	Uncharacterized protein.	Uncharacterized protein.	0.443
I1P1J0_ORYGL	I1NVI9_ORYGL	I1P1J0	I1NVI9	Uncharacterized protein.	Uncharacterized protein.	0.734
I1P1J0_ORYGL	I1P7M7_ORYGL	I1P1J0	I1P7M7	Uncharacterized protein.	Uncharacterized protein.	0.946
I1P1J0_ORYGL	I1PDT2_ORYGL	I1P1J0	I1PDT2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.648
I1P1J0_ORYGL	I1PIY3_ORYGL	I1P1J0	I1PIY3	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.795
I1P1J0_ORYGL	I1PLB3_ORYGL	I1P1J0	I1PLB3	Uncharacterized protein.	Uncharacterized protein.	0.869
I1P1J0_ORYGL	I1Q1I1_ORYGL	I1P1J0	I1Q1I1	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.750
I1P1J0_ORYGL	I1Q710_ORYGL	I1P1J0	I1Q710	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.750
I1P1J0_ORYGL	I1QFG9_ORYGL	I1P1J0	I1QFG9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.708
I1P1J0_ORYGL	I1QFH1_ORYGL	I1P1J0	I1QFH1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.708