STRINGSTRING
G2XLE9_ORYGL G2XLE9_ORYGL I1NQV0_ORYGL I1NQV0_ORYGL I1NVM0_ORYGL I1NVM0_ORYGL I1NWK9_ORYGL I1NWK9_ORYGL I1NWT7_ORYGL I1NWT7_ORYGL I1P6L3_ORYGL I1P6L3_ORYGL I1P840_ORYGL I1P840_ORYGL I1P8I6_ORYGL I1P8I6_ORYGL I1P9J3_ORYGL I1P9J3_ORYGL I1PF89_ORYGL I1PF89_ORYGL I1PHC6_ORYGL I1PHC6_ORYGL I1PMX0_ORYGL I1PMX0_ORYGL I1PQZ7_ORYGL I1PQZ7_ORYGL I1PRR2_ORYGL I1PRR2_ORYGL I1PSE1_ORYGL I1PSE1_ORYGL I1PSI8_ORYGL I1PSI8_ORYGL I1PSM8_ORYGL I1PSM8_ORYGL I1PU43_ORYGL I1PU43_ORYGL I1PVB6_ORYGL I1PVB6_ORYGL I1PVG5_ORYGL I1PVG5_ORYGL I1Q4W0_ORYGL I1Q4W0_ORYGL I1Q8F3_ORYGL I1Q8F3_ORYGL I1QAJ9_ORYGL I1QAJ9_ORYGL I1QAX6_ORYGL I1QAX6_ORYGL I1QC61_ORYGL I1QC61_ORYGL I1QCB8_ORYGL I1QCB8_ORYGL I1QE68_ORYGL I1QE68_ORYGL I1QHV3_ORYGL I1QHV3_ORYGL I1QLW3_ORYGL I1QLW3_ORYGL I1QP13_ORYGL I1QP13_ORYGL I1QU81_ORYGL I1QU81_ORYGL I1QXG3_ORYGL I1QXG3_ORYGL I1QYC7_ORYGL I1QYC7_ORYGL I1R3X1_ORYGL I1R3X1_ORYGL I1R770_ORYGL I1R770_ORYGL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G2XLE9_ORYGLHypothetical_protein. (292 aa)
I1NQV0_ORYGLUncharacterized protein. (766 aa)
I1NVM0_ORYGLTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
I1NWK9_ORYGLRPOL4c domain-containing protein. (142 aa)
I1NWT7_ORYGLUncharacterized protein. (289 aa)
I1P6L3_ORYGLTFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (136 aa)
I1P840_ORYGLTFIIE beta domain-containing protein. (339 aa)
I1P8I6_ORYGLUncharacterized protein. (529 aa)
I1P9J3_ORYGLTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (527 aa)
I1PF89_ORYGLCYCLIN domain-containing protein; Belongs to the cyclin family. (330 aa)
I1PHC6_ORYGLUncharacterized protein. (666 aa)
I1PMX0_ORYGLGeneral transcription factor IIH subunit. (433 aa)
I1PQZ7_ORYGLRNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (451 aa)
I1PRR2_ORYGLTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
I1PSE1_ORYGLHelicase ATP-binding domain-containing protein. (758 aa)
I1PSI8_ORYGLUncharacterized protein. (207 aa)
I1PSM8_ORYGLSHS2_Rpb7-N domain-containing protein. (175 aa)
I1PU43_ORYGLUncharacterized protein. (394 aa)
I1PVB6_ORYGLProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (424 aa)
I1PVG5_ORYGLUncharacterized protein. (177 aa)
I1Q4W0_ORYGLUncharacterized protein. (191 aa)
I1Q8F3_ORYGLRNA_pol_L_2 domain-containing protein. (120 aa)
I1QAJ9_ORYGLUncharacterized protein. (142 aa)
I1QAX6_ORYGLTFIIB-type domain-containing protein. (354 aa)
I1QC61_ORYGLDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
I1QCB8_ORYGLSpt4 domain-containing protein. (146 aa)
I1QE68_ORYGLTFIIF_beta domain-containing protein. (74 aa)
I1QHV3_ORYGLUncharacterized protein. (604 aa)
I1QLW3_ORYGLRPOLD domain-containing protein. (333 aa)
I1QP13_ORYGLUncharacterized protein. (962 aa)
I1QU81_ORYGLTranscription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (279 aa)
I1QXG3_ORYGLUncharacterized protein. (511 aa)
I1QYC7_ORYGLUncharacterized protein. (74 aa)
I1R3X1_ORYGLUncharacterized protein. (319 aa)
I1R770_ORYGLDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.