26 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1PM04_ORYGL	Uncharacterized protein. (311 aa)
	I1NKL3_ORYGL	Uncharacterized protein. (417 aa)
	I1NL65_ORYGL	Autophagy-related protein 3. (317 aa)
	I1NPN1_ORYGL	Uncharacterized protein. (1045 aa)
	I1NQP2_ORYGL	Uncharacterized protein. (501 aa)
	I1NQQ3_ORYGL	Uncharacterized protein. (113 aa)
	I1NUY6_ORYGL	WD_REPEATS_REGION domain-containing protein. (457 aa)
	I1NXV5_ORYGL	Integrase-type domain-containing protein. (1140 aa)
	I1P2K2_ORYGL	ATG13 domain-containing protein. (543 aa)
	I1P703_ORYGL	Protein kinase domain-containing protein. (652 aa)
	I1P9G6_ORYGL	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (902 aa)
	I1P9N2_ORYGL	Uncharacterized protein. (566 aa)
	I1PFF5_ORYGL	WD_REPEATS_REGION domain-containing protein. (511 aa)
	I1PG71_ORYGL	Uncharacterized protein. (1259 aa)
	I1PNF5_ORYGL	ATG13 domain-containing protein. (520 aa)
	I1PSY6_ORYGL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (814 aa)
	I1Q0D3_ORYGL	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family. (93 aa)
	I1Q3V9_ORYGL	Uncharacterized protein. (451 aa)
	I1QES4_ORYGL	Uncharacterized protein. (1253 aa)
	I1QHH0_ORYGL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (827 aa)
	I1QNV8_ORYGL	COPI_C domain-containing protein. (417 aa)
	I1QST1_ORYGL	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (927 aa)
	I1QVX7_ORYGL	Autophagy-related protein 3. (317 aa)
	I1QXY3_ORYGL	ATG13 domain-containing protein. (601 aa)
	I1R605_ORYGL	Uncharacterized protein. (165 aa)
	I1R662_ORYGL	Uncharacterized protein. (208 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NKL3_ORYGL	I1NL65_ORYGL	I1NKL3	I1NL65	Uncharacterized protein.	Autophagy-related protein 3.	0.419
I1NKL3_ORYGL	I1NPN1_ORYGL	I1NKL3	I1NPN1	Uncharacterized protein.	Uncharacterized protein.	0.561
I1NKL3_ORYGL	I1NQP2_ORYGL	I1NKL3	I1NQP2	Uncharacterized protein.	Uncharacterized protein.	0.509
I1NKL3_ORYGL	I1NXV5_ORYGL	I1NKL3	I1NXV5	Uncharacterized protein.	Integrase-type domain-containing protein.	0.414
I1NKL3_ORYGL	I1P9G6_ORYGL	I1NKL3	I1P9G6	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.453
I1NKL3_ORYGL	I1P9N2_ORYGL	I1NKL3	I1P9N2	Uncharacterized protein.	Uncharacterized protein.	0.509
I1NKL3_ORYGL	I1PFF5_ORYGL	I1NKL3	I1PFF5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.443
I1NKL3_ORYGL	I1Q0D3_ORYGL	I1NKL3	I1Q0D3	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.448
I1NKL3_ORYGL	I1QST1_ORYGL	I1NKL3	I1QST1	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.453
I1NKL3_ORYGL	I1QVX7_ORYGL	I1NKL3	I1QVX7	Uncharacterized protein.	Autophagy-related protein 3.	0.419
I1NL65_ORYGL	I1NKL3_ORYGL	I1NL65	I1NKL3	Autophagy-related protein 3.	Uncharacterized protein.	0.419
I1NL65_ORYGL	I1NPN1_ORYGL	I1NL65	I1NPN1	Autophagy-related protein 3.	Uncharacterized protein.	0.991
I1NL65_ORYGL	I1NQP2_ORYGL	I1NL65	I1NQP2	Autophagy-related protein 3.	Uncharacterized protein.	0.866
I1NL65_ORYGL	I1NUY6_ORYGL	I1NL65	I1NUY6	Autophagy-related protein 3.	WD_REPEATS_REGION domain-containing protein.	0.419
I1NL65_ORYGL	I1NXV5_ORYGL	I1NL65	I1NXV5	Autophagy-related protein 3.	Integrase-type domain-containing protein.	0.453
I1NL65_ORYGL	I1P2K2_ORYGL	I1NL65	I1P2K2	Autophagy-related protein 3.	ATG13 domain-containing protein.	0.575
I1NL65_ORYGL	I1P703_ORYGL	I1NL65	I1P703	Autophagy-related protein 3.	Protein kinase domain-containing protein.	0.907
I1NL65_ORYGL	I1P9G6_ORYGL	I1NL65	I1P9G6	Autophagy-related protein 3.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.416
I1NL65_ORYGL	I1P9N2_ORYGL	I1NL65	I1P9N2	Autophagy-related protein 3.	Uncharacterized protein.	0.866
I1NL65_ORYGL	I1PFF5_ORYGL	I1NL65	I1PFF5	Autophagy-related protein 3.	WD_REPEATS_REGION domain-containing protein.	0.993