31 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1R930_ORYGL	Protein kinase domain-containing protein. (315 aa)
	I1R920_ORYGL	Uncharacterized protein. (683 aa)
	I1R658_ORYGL	Uncharacterized protein. (1069 aa)
	I1R5Z8_ORYGL	Protein kinase domain-containing protein. (423 aa)
	I1R5Y5_ORYGL	Protein kinase domain-containing protein. (327 aa)
	I1R4R4_ORYGL	Protein kinase domain-containing protein. (630 aa)
	I1QYW0_ORYGL	Protein kinase domain-containing protein. (579 aa)
	I1QWT7_ORYGL	Uncharacterized protein; Belongs to the cyclin family. (630 aa)
	I1QT32_ORYGL	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
	I1QMN8_ORYGL	Uncharacterized protein. (167 aa)
	I1QF29_ORYGL	Protein kinase domain-containing protein. (748 aa)
	I1QD04_ORYGL	Protein kinase domain-containing protein. (574 aa)
	I1QCB8_ORYGL	Spt4 domain-containing protein. (146 aa)
	I1QBW5_ORYGL	Protein kinase domain-containing protein. (779 aa)
	I1Q7G5_ORYGL	Uncharacterized protein. (667 aa)
	I1PWW1_ORYGL	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1639 aa)
	I1PV98_ORYGL	Protein kinase domain-containing protein. (519 aa)
	I1PRG5_ORYGL	Protein kinase domain-containing protein. (586 aa)
	I1PK56_ORYGL	Uncharacterized protein. (1056 aa)
	I1PFM5_ORYGL	Uncharacterized protein. (608 aa)
	I1PE45_ORYGL	CDC73_C domain-containing protein. (375 aa)
	I1PBA7_ORYGL	Protein kinase domain-containing protein. (561 aa)
	I1P9J3_ORYGL	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (527 aa)
	I1P4L8_ORYGL	Uncharacterized protein. (802 aa)
	I1P1C2_ORYGL	Protein kinase domain-containing protein. (725 aa)
	I1NZP1_ORYGL	Protein kinase domain-containing protein. (644 aa)
	I1NWZ7_ORYGL	Uncharacterized protein; Belongs to the cyclin family. (446 aa)
	I1NVD2_ORYGL	Protein kinase domain-containing protein. (513 aa)
	I1NN26_ORYGL	Protein kinase domain-containing protein. (557 aa)
	I1NL73_ORYGL	Protein kinase domain-containing protein. (633 aa)
	I1R931_ORYGL	Uncharacterized protein. (97 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NL73_ORYGL	I1NWZ7_ORYGL	I1NL73	I1NWZ7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.874
I1NL73_ORYGL	I1PE45_ORYGL	I1NL73	I1PE45	Protein kinase domain-containing protein.	CDC73_C domain-containing protein.	0.517
I1NL73_ORYGL	I1PK56_ORYGL	I1NL73	I1PK56	Protein kinase domain-containing protein.	Uncharacterized protein.	0.616
I1NL73_ORYGL	I1QCB8_ORYGL	I1NL73	I1QCB8	Protein kinase domain-containing protein.	Spt4 domain-containing protein.	0.705
I1NL73_ORYGL	I1QWT7_ORYGL	I1NL73	I1QWT7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.874
I1NL73_ORYGL	I1R658_ORYGL	I1NL73	I1R658	Protein kinase domain-containing protein.	Uncharacterized protein.	0.616
I1NN26_ORYGL	I1NWZ7_ORYGL	I1NN26	I1NWZ7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.874
I1NN26_ORYGL	I1PE45_ORYGL	I1NN26	I1PE45	Protein kinase domain-containing protein.	CDC73_C domain-containing protein.	0.521
I1NN26_ORYGL	I1PK56_ORYGL	I1NN26	I1PK56	Protein kinase domain-containing protein.	Uncharacterized protein.	0.616
I1NN26_ORYGL	I1QCB8_ORYGL	I1NN26	I1QCB8	Protein kinase domain-containing protein.	Spt4 domain-containing protein.	0.705
I1NN26_ORYGL	I1QWT7_ORYGL	I1NN26	I1QWT7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.874
I1NN26_ORYGL	I1R658_ORYGL	I1NN26	I1R658	Protein kinase domain-containing protein.	Uncharacterized protein.	0.616
I1NVD2_ORYGL	I1NWZ7_ORYGL	I1NVD2	I1NWZ7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.902
I1NVD2_ORYGL	I1P9J3_ORYGL	I1NVD2	I1P9J3	Protein kinase domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.536
I1NVD2_ORYGL	I1PE45_ORYGL	I1NVD2	I1PE45	Protein kinase domain-containing protein.	CDC73_C domain-containing protein.	0.517
I1NVD2_ORYGL	I1PK56_ORYGL	I1NVD2	I1PK56	Protein kinase domain-containing protein.	Uncharacterized protein.	0.616
I1NVD2_ORYGL	I1QCB8_ORYGL	I1NVD2	I1QCB8	Protein kinase domain-containing protein.	Spt4 domain-containing protein.	0.705
I1NVD2_ORYGL	I1QT32_ORYGL	I1NVD2	I1QT32	Protein kinase domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.536
I1NVD2_ORYGL	I1QWT7_ORYGL	I1NVD2	I1QWT7	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.888
I1NVD2_ORYGL	I1R658_ORYGL	I1NVD2	I1R658	Protein kinase domain-containing protein.	Uncharacterized protein.	0.616