25 items (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1QW14_ORYGL	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (291 aa)
	I1NL59_ORYGL	Uncharacterized protein. (216 aa)
	I1NL60_ORYGL	Uncharacterized protein. (189 aa)
	I1NRD0_ORYGL	Uncharacterized protein. (222 aa)
	I1NSX4_ORYGL	Uncharacterized protein. (208 aa)
	I1NYN7_ORYGL	Uncharacterized protein. (210 aa)
	I1NZ38_ORYGL	Uncharacterized protein. (150 aa)
	I1NZ39_ORYGL	Uncharacterized protein. (204 aa)
	I1PAF2_ORYGL	Uncharacterized protein. (229 aa)
	I1PAH1_ORYGL	Bet_v_1 domain-containing protein; Belongs to the BetVI family. (160 aa)
	I1NKT0_ORYGL	Uncharacterized protein. (168 aa)
	I1PFQ4_ORYGL	Uncharacterized protein. (290 aa)
	I1PQ03_ORYGL	Uncharacterized protein. (776 aa)
	I1PRD8_ORYGL	Uncharacterized protein. (117 aa)
	I1PSX2_ORYGL	Serine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (492 aa)
	I1PTC9_ORYGL	Uncharacterized protein. (209 aa)
	I1PTX2_ORYGL	Uncharacterized protein. (125 aa)
	I1PXS5_ORYGL	Serine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (519 aa)
	I1PYI3_ORYGL	Uncharacterized protein. (769 aa)
	I1Q2P2_ORYGL	Uncharacterized protein. (136 aa)
	I1QW68_ORYGL	Uncharacterized protein. (211 aa)
	I1Q2P3_ORYGL	Uncharacterized protein. (158 aa)
	I1Q2Q0_ORYGL	Uncharacterized protein. (206 aa)
	I1Q2Q3_ORYGL	Uncharacterized protein. (206 aa)
	I1QAT3_ORYGL	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (285 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1PFQ4_ORYGL	I1PQ03_ORYGL	I1PFQ4	I1PQ03	Uncharacterized protein.	Uncharacterized protein.	0.621
I1PFQ4_ORYGL	I1PYI3_ORYGL	I1PFQ4	I1PYI3	Uncharacterized protein.	Uncharacterized protein.	0.621
I1PQ03_ORYGL	I1PFQ4_ORYGL	I1PQ03	I1PFQ4	Uncharacterized protein.	Uncharacterized protein.	0.621
I1PTC9_ORYGL	I1QW68_ORYGL	I1PTC9	I1QW68	Uncharacterized protein.	Uncharacterized protein.	0.464
I1PYI3_ORYGL	I1PFQ4_ORYGL	I1PYI3	I1PFQ4	Uncharacterized protein.	Uncharacterized protein.	0.621
I1QAT3_ORYGL	I1QW14_ORYGL	I1QAT3	I1QW14	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.951
I1QW14_ORYGL	I1QAT3_ORYGL	I1QW14	I1QAT3	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.951
I1QW68_ORYGL	I1PTC9_ORYGL	I1QW68	I1PTC9	Uncharacterized protein.	Uncharacterized protein.	0.464