(10 nodes) Formation of anatomical boundary network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NYN6_ORYGL	Homeobox domain-containing protein. (539 aa)
	I1Q283_ORYGL	NAC domain-containing protein. (373 aa)
	I1QIY6_ORYGL	Uncharacterized protein. (366 aa)
	I1QK25_ORYGL	NAC domain-containing protein. (336 aa)
	I1PTA6_ORYGL	Uncharacterized protein. (87 aa)
	I1Q1A4_ORYGL	Uncharacterized protein. (478 aa)
	I1NWI7_ORYGL	Uncharacterized protein. (2200 aa)
	I1NL87_ORYGL	Uncharacterized protein. (77 aa)
	I1NKL9_ORYGL	LOB domain-containing protein. (252 aa)
	I1Q1A5_ORYGL	SnAC domain-containing protein. (2825 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NL87_ORYGL	I1Q283_ORYGL	I1NL87	I1Q283	Uncharacterized protein.	NAC domain-containing protein.	0.469
I1NL87_ORYGL	I1QK25_ORYGL	I1NL87	I1QK25	Uncharacterized protein.	NAC domain-containing protein.	0.449
I1PTA6_ORYGL	I1Q283_ORYGL	I1PTA6	I1Q283	Uncharacterized protein.	NAC domain-containing protein.	0.459
I1PTA6_ORYGL	I1QK25_ORYGL	I1PTA6	I1QK25	Uncharacterized protein.	NAC domain-containing protein.	0.416
I1Q1A4_ORYGL	I1Q1A5_ORYGL	I1Q1A4	I1Q1A5	Uncharacterized protein.	SnAC domain-containing protein.	0.447
I1Q1A5_ORYGL	I1Q1A4_ORYGL	I1Q1A5	I1Q1A4	SnAC domain-containing protein.	Uncharacterized protein.	0.447
I1Q283_ORYGL	I1NL87_ORYGL	I1Q283	I1NL87	NAC domain-containing protein.	Uncharacterized protein.	0.469
I1Q283_ORYGL	I1PTA6_ORYGL	I1Q283	I1PTA6	NAC domain-containing protein.	Uncharacterized protein.	0.459
I1QK25_ORYGL	I1NL87_ORYGL	I1QK25	I1NL87	NAC domain-containing protein.	Uncharacterized protein.	0.449
I1QK25_ORYGL	I1PTA6_ORYGL	I1QK25	I1PTA6	NAC domain-containing protein.	Uncharacterized protein.	0.416