(11 nodes) SWI/SNF complex network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NY61_ORYGL	Uncharacterized protein. (507 aa)
	I1P615_ORYGL	SWIB domain-containing protein. (405 aa)
	I1P677_ORYGL	GLTSCR1 domain-containing protein. (351 aa)
	I1P778_ORYGL	Bromo domain-containing protein. (483 aa)
	I1PKK2_ORYGL	SWIB domain-containing protein. (463 aa)
	I1PKQ5_ORYGL	GLTSCR1 domain-containing protein. (303 aa)
	I1QB12_ORYGL	Bromo domain-containing protein. (1131 aa)
	I1QC38_ORYGL	Uncharacterized protein. (460 aa)
	I1QFH0_ORYGL	Uncharacterized protein; Belongs to the actin family. (489 aa)
	I1QR18_ORYGL	Bromo domain-containing protein. (485 aa)
	I1R695_ORYGL	GLTSCR1 domain-containing protein. (423 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NY61_ORYGL	I1P615_ORYGL	I1NY61	I1P615	Uncharacterized protein.	SWIB domain-containing protein.	0.908
I1NY61_ORYGL	I1PKK2_ORYGL	I1NY61	I1PKK2	Uncharacterized protein.	SWIB domain-containing protein.	0.908
I1NY61_ORYGL	I1QC38_ORYGL	I1NY61	I1QC38	Uncharacterized protein.	Uncharacterized protein.	0.936
I1NY61_ORYGL	I1QFH0_ORYGL	I1NY61	I1QFH0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.950
I1P615_ORYGL	I1NY61_ORYGL	I1P615	I1NY61	SWIB domain-containing protein.	Uncharacterized protein.	0.908
I1P615_ORYGL	I1QC38_ORYGL	I1P615	I1QC38	SWIB domain-containing protein.	Uncharacterized protein.	0.989
I1P615_ORYGL	I1QFH0_ORYGL	I1P615	I1QFH0	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.996
I1PKK2_ORYGL	I1NY61_ORYGL	I1PKK2	I1NY61	SWIB domain-containing protein.	Uncharacterized protein.	0.908
I1PKK2_ORYGL	I1QC38_ORYGL	I1PKK2	I1QC38	SWIB domain-containing protein.	Uncharacterized protein.	0.989
I1PKK2_ORYGL	I1QFH0_ORYGL	I1PKK2	I1QFH0	SWIB domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.996
I1QC38_ORYGL	I1NY61_ORYGL	I1QC38	I1NY61	Uncharacterized protein.	Uncharacterized protein.	0.936
I1QC38_ORYGL	I1P615_ORYGL	I1QC38	I1P615	Uncharacterized protein.	SWIB domain-containing protein.	0.989
I1QC38_ORYGL	I1PKK2_ORYGL	I1QC38	I1PKK2	Uncharacterized protein.	SWIB domain-containing protein.	0.989
I1QC38_ORYGL	I1QFH0_ORYGL	I1QC38	I1QFH0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.991
I1QFH0_ORYGL	I1NY61_ORYGL	I1QFH0	I1NY61	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.950
I1QFH0_ORYGL	I1P615_ORYGL	I1QFH0	I1P615	Uncharacterized protein; Belongs to the actin family.	SWIB domain-containing protein.	0.996
I1QFH0_ORYGL	I1PKK2_ORYGL	I1QFH0	I1PKK2	Uncharacterized protein; Belongs to the actin family.	SWIB domain-containing protein.	0.996
I1QFH0_ORYGL	I1QC38_ORYGL	I1QFH0	I1QC38	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.991