STRINGSTRING
I1PZM7_ORYGL I1PZM7_ORYGL I1NNK4_ORYGL I1NNK4_ORYGL I1QE22_ORYGL I1QE22_ORYGL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I1PZM7_ORYGLTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
I1NNK4_ORYGLTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (180 aa)
I1QE22_ORYGLTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (143 aa)
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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